Lactuca sativa (garden lettuce): 111878274
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Entry
111878274 CDS
T05352
Name
(RefSeq) transcription initiation factor TFIID subunit 1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111878274
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lsv01001
]
111878274
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111878274
03036 Chromosome and associated proteins [BR:
lsv03036
]
111878274
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
111878274
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
111878274
Protein kinases [BR:
lsv01001
]
Serine/threonine kinases: Other
TAF1 family
111878274
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111878274
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
111878274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
ubiquitin
TBP-binding
Rad60-SLD
zf-CCHC_6
Ubiquitin_5
HTH_3
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
111878274
NCBI-ProteinID:
XP_052620761
LinkDB
All DBs
Position
6:complement(183016037..183024965)
Genome browser
AA seq
1858 aa
AA seq
DB search
MDSDAGNTSQDGRGTDDRDEDDDDEYEDARDGNRLLEFMFGNIDGAGDLDIDYLDEDAKE
HLAALADKLGSSLTDIHLSVKTSQTSADVAEQDYDLKAENAVDYEDIDEQYEGPEVQALT
EEDYLLPKSDYVSTTVPPVASSSLFDDENYDEDEEEEELQKELDRVDNVDQVDQVQSPSL
PVVPQEKCSPEDGSPAVEIENSDPDVMEPQKEDTDMLEEPVEAKSSTPLPVLCVEDGNVI
LRFSEIFAIHEPLKKAVKREQWFSVPKEKYKSMDVSDIVEEDEEAFLKGSLKGFPYMRHT
HVFQDDLSTSHEDKLDLPKSGIVDEDTTVASEVDDQRKDYCHDVIPSSNKLFSDDYFPLD
QQDWENRIIFDNSPAVSETSGGSEISGPESDSLLKSKTRVESKSDEEDQGYFCHSVEPFG
SRKSPKSYSSSEETIYHPQLLRLESRLETNDAKKDTTVESDTIKRFNKLTLRNKDVLDGS
WMDRIVWDPNQSVTKPKLLLDLQDEQMLFEILDNKDGDDLQLHAGAMITTRSAESAPDSL
ELLHGYGGGRFNIANDKFYSNRKSSQQLKSHSKKRTSHGVKVLHSIPALKLQTMKAKLSN
KDIAYFHRPKALWYPHENVVALKEQGKLLTKGSMKIVLKSLGGKGSKLHVDAEETISSLK
GKATKKLDFKPSEAVKIIYSGKELEDEKSLAEQDVRPNSLLHLVRTRIHLLPRAQKLPSD
NKSLRPPGSFKKKSDLSARDGHSFLMEYCEERPLLLGNPGMGARLCTYYQKSSPGDQTAT
QLRSVPNNFGNILTLDPADKSPFLGDIKPGSTQSCLETNMYRAPIYPHKLSSTDYLLIRS
PKGKLSLRRIDRIYVVGQQEPHMEVMSPVSKGVQMYNMNRLLVFMYREFRALQKRGLTPA
IRANELSAQFANVAEVSLRKRLKLFCDFQRGSWVMKRNFRIPLEEELRRMVTPENVCAFE
SMLAGMYRLKRLGISMTHPSGLSSAMNQLPDEAIALAAASHIERELQITPWNLSSNFVAC
TNQDRGNIERLEITGVGDPSGRGLGFSYVRTAPKAPVSNAIAKKKVAINRGGSTVTGTDA
DLRRLSMDAAREVLIKFNVPEEQIAKLTRWHRIAMIRKLSSEQAASGVKVDPTTISKYAR
GQRMSFLQLQQQTREKCQEIWDRQVQNLSAVDGEENESDIEAHSDLDSFAGDLENLLDAE
ECDDGEDDNNNNNNNYDSNNLVAGVKGLKMRRMPSQAQADVENEDEAAEAAELCRMLMDG
DDEADRKKKKVKDTGATPMSNHNLKNKERLKGLNTPVKTMSGVTRPDGSFSINDNAVKSL
KDDEMFPYRKNFSGKMKPKKKDDLEQVGGLLNKKLRILNDGMNIMKVGNTKKNARESFAC
GACGQFGHMKTNKHCPKYRENSNIQIESKDPEKGPTKSTGLGLDSITKSQPKNTIKKMIQ
KSGSKLAVIEPQPPQEEEKTSLKAKVLKVKCGPANSNKIPEKPTPSTSQISDKPVTSDTE
TVNKSSIKVNKIIFSNKTKSEDIQPESHKPAASLVIRPPESHRNPPPPPQPRKTIVIKRP
KEVFDFDQVSQSQEVSPVTEPRKTKRITELSGFQKQPRSNKSKDHHHNHHNHNSQIWEED
QHALRIAERQRILYEQQQQQAQQARKLEEQERVAEIRRFEEDIKREREEERRQREKKKKK
KNIFFEPRNNEYLEESPRPRRDDRRVPERDHHRTAKRKPVVELGGRFGAEYAPTVKRRRG
GEVGLANILEKIIDTLKANNVSFLFLKPVTKKEAPDYLRIIDRPMDLSTMREKVRRLEYK
SRDAFRHDMWQITFNAHKYNIGRNPGIPPLADQLLELCDFLLSEYDAVLSEAEADIDE
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atggattctgatgctgggaatacttctcaagatggtaggggcactgatgaccgtgatgaa
gatgatgatgatgaatatgaagatgctcgtgatggcaatcgtcttttggaattcatgttt
ggaaatatcgatggggctggtgatcttgatattgattaccttgatgaggatgcaaaggag
catcttgctgcactagctgacaagcttggttcatcactaacagatatccatctgtcagta
aaaacttcacaaacatctgctgatgttgctgaacaagattatgatctgaaggctgaaaat
gcagttgattatgaagatattgatgaacagtatgagggaccagaagtccaagcattgact
gaggaggactatctattaccaaaatctgattatgtttctacaactgtgccacctgttgcc
tcatcttcattgtttgatgatgaaaattatgatgaagatgaagaagaggaagaattacag
aaagaacttgatcgtgtggataatgttgaccaagttgaccaagttcaaagcccttcatta
ccagtggttcctcaagaaaaatgctctccagaggatggtagtcctgcagttgaaatagaa
aactcagatcctgatgttatggagcctcaaaaggaggacacagatatgttggaagagcca
gttgaagctaaaagttcaacaccacttcctgttctctgtgtagaagatggaaatgtgatc
ttacgattttcagaaatatttgctattcatgagcctttaaagaaagctgtaaagagggaa
caatggttttctgttccaaaagaaaaatacaagtccatggatgtatctgatattgtggag
gaagatgaagaggcgtttttaaagggctctttaaaaggttttccttacatgagacacaca
catgtatttcaagatgatttatcaacatcacatgaggataaattagaccttccaaaatct
gggattgttgatgaagatacaacagtggcttcagaagttgatgatcaaaggaaagactat
tgtcatgatgttatcccatccagtaacaaactcttcagtgatgattatttccctcttgat
caacaagactgggaaaatagaataatttttgataattctccagctgtaagtgaaacttct
ggtggaagtgagatttctggacctgaatccgactcattattgaagtccaagacacgggtt
gagtcgaaatcagacgaggaagatcaagggtatttttgtcattctgtagagccattcggt
tcaagaaaatctccaaaatcctacagttcatctgaagaaaccatatatcatccccaactt
ttgagattagaatcacgattggaaacaaatgatgctaaaaaagatacaacagttgaaagc
gacaccattaaacgattcaacaaactcactttacgcaataaagatgttcttgatggatct
tggatggatcgaatagtgtgggacccgaatcaatctgttacaaagccaaaattacttctt
gatcttcaagatgaacagatgctttttgaaattttggataacaaagatggagatgatctt
cagcttcatgctggagccatgatcacaactcggtctgctgagtcagcaccagactcattg
gagctattacatggttatggaggtgggagatttaatatagctaatgacaaattctattcc
aacaggaaatcttcccaacagttgaaatcacattccaagaaacgcacatcacatggtgtt
aaagtcttgcattcaatacctgctctcaagctacagacaatgaaagccaaacttagcaat
aaagatatagcctattttcataggccaaaagctttatggtatcctcatgaaaatgtggtg
gcacttaaagaacaaggaaagcttcttacaaaagggtcaatgaaaattgtattgaaaagc
ttgggagggaaagggagcaagcttcatgtagatgctgaggagactatttcatctctcaaa
ggaaaagctaccaagaagcttgattttaaaccaagtgaagctgtgaaaattatatactct
ggaaaggagcttgaagatgaaaaatctcttgctgaacaagatgttagaccaaattctttg
ctgcatcttgttcgtacaagaatacatttattaccaagggctcaaaaacttcctagtgac
aacaagtccttacgccctcctggatcttttaaaaagaaatcagatctttcagctagagat
ggtcattcttttctaatggagtattgtgaggaaaggcctttactccttgggaatcctgga
atgggtgctcgattatgcacttattaccaaaaatcaagtcctggtgatcaaacagccacc
caattgcgtagtgttcccaacaattttgggaacattcttacactcgatccagctgataaa
tccccttttttaggagatataaaacctggttcaactcaatcatgtcttgaaacaaatatg
tacagagctccaatttatccacataaactctcatccactgactatttactcattcgctct
ccaaagggaaagctctcgttaagacgcattgaccggatttacgttgttggtcaacaggag
cctcacatggaggtgatgtcccctgtatcaaaaggtgttcagatgtataatatgaatagg
cttctggtgttcatgtatcgtgagtttcgtgctcttcaaaaacgtggcttgacacctgcc
attcgtgccaatgagttatctgcacagtttgcaaatgtagctgaagtttctttaagaaag
aggttaaagttattctgtgattttcagaggggctcatgggttatgaagcgaaatttccgt
attccattagaggaagagcttagaagaatggtgacaccagaaaatgtgtgtgcttttgaa
agcatgttagctggaatgtacagactgaaacgtttaggaatcagcatgactcatccatct
ggtctctcctctgcaatgaatcagctccctgatgaagcaattgctttagctgctgcttcc
cacatcgagagagaattacaaataaccccctggaatttaagcagcaactttgttgcttgt
acaaatcaggatagaggaaacatcgagagattggagattactggtgttggtgatccatct
ggtagaggattaggatttagttatgttcgaactgctcccaaggctccagtttcaaatgcc
attgcaaagaaaaaagttgctataaacagaggaggatctacagtcactggaactgatgct
gatcttcgtagattaagcatggatgctgcacgcgaggtgcttattaaattcaatgttcca
gaagaacagattgcaaaacttacaagatggcatcggattgcaatgatccggaagctttct
agtgaacaagctgcatcaggagtaaaagtggaccccacaaccataagcaaatatgcacgt
ggtcaaaggatgtctttcttgcagcttcaacaacaaacacgagaaaaatgccaggagatt
tgggatagacaagttcaaaacctttctgctgttgatggtgaagaaaacgaaagcgacatt
gaagcacatagtgaccttgattcgtttgcaggggatcttgagaaccttctagatgctgaa
gaatgtgatgatggtgaagatgataataataataataataataattatgattctaataac
ttggtggctggtgttaaaggtcttaaaatgagacgcatgccttcgcaagctcaagctgat
gtggaaaatgaagatgaagctgctgaagctgctgagttatgtagaatgctcatggatgga
gatgacgaggcggatcggaagaagaaaaaagtgaaagatacaggagcaactcctatgtcg
aatcataatttgaaaaataaggagaggttgaagggactcaacacacctgtgaaaactatg
tctggtgttacacgacccgatggatccttttctataaatgataatgctgtcaagtcatta
aaagatgatgaaatgtttccttacaggaagaacttttctggaaagatgaaacccaaaaag
aaggatgatcttgaacaagttggtggtttgctgaataagaagcttagaattttgaatgat
ggaatgaatattatgaaggttggaaatacaaagaaaaatgcaagagagagttttgcatgt
ggagcttgtggtcagtttggtcacatgaaaaccaacaaacactgccccaagtacagagaa
aactccaacattcaaatcgaaagcaaagatcccgaaaaagggcccacaaaatccacgggt
ttaggtttagactcaatcaccaaatcccaaccaaaaaacaccataaaaaagatgatacaa
aaaagcgggtcaaaacttgcagtcatcgaacctcaacctccacaagaggaggaaaaaacc
tctttaaaagccaaagtcctcaaagtcaaatgcgggcccgcaaacagcaacaaaatcccc
gaaaaacccactcccagcacctcacaaatctccgacaaacccgtaacctcagacaccgaa
acagtcaacaaatcttcaatcaaagtcaacaaaatcatattctccaacaaaacaaaaagc
gaagacatccaaccggaatcccataaacccgccgcctccctcgtaatccggccaccggaa
agtcaccggaatcctccaccaccaccgcaaccccggaaaacaatcgtcatcaaacgcccg
aaagaagtctttgactttgaccaggtcagtcaaagtcaagaagtcagcccggtaaccgag
cctcgaaaaaccaaaagaatcaccgaattatccggtttccaaaaacaacctcgatcaaat
aaatcaaaagatcatcatcataatcatcacaatcataattcccaaatttgggaagaagac
caacacgcgttaagaatcgcagagagacaaaggatattatatgaacaacaacagcaacaa
gcacaacaagcgagaaagctagaagaacaagagagagtggcggagattaggcggttcgag
gaggacataaaacgcgaaagggaggaggagaggcggcaacgtgagaaaaaaaagaaaaaa
aagaacatatttttcgaaccaaggaacaacgagtatctcgaggagtctcctcgacccagg
cgagacgaccgccgggtcccggagcgcgaccaccaccgaaccgcaaaacgtaaacccgtc
gtcgaattaggcgggcggttcggagcggagtatgccccgaccgtgaagcggcgtaggggc
ggagaggttggtttggcgaatatacttgagaagataattgacacgctaaaagcaaacaat
gtgtcgtttcttttcttgaaacccgtgactaaaaaggaagcgccggattaccttcggata
atagatcggccaatggacttgtcaacaatgcgggagaaagtgagaagattggagtataaa
agccgggatgcgttcagacatgacatgtggcagataacattcaatgctcataaatataac
attggaagaaatccgggtattcctccccttgctgatcagctcttggagctttgtgatttt
ttgttatcggaatatgatgcggttttgagtgaagcggaagcggatatagacgaatga
DBGET
integrated database retrieval system
