Lactuca sativa (garden lettuce): 111880218
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Entry
111880218 CDS
T05352
Name
(RefSeq) agamous-like MADS-box protein AGL27 isoform X1
KO
K27808
MADS-box protein FLC/MAF
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111880218
Transcription factors [BR:
lsv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
111880218
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
UPF0242
LUC7
SFXNs
DUF4164
MctB
FapA
Motif
Other DBs
NCBI-GeneID:
111880218
NCBI-ProteinID:
XP_023732397
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Position
4:complement(19107149..19121632)
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AA seq
218 aa
AA seq
DB search
MGRRKLEIKRIQDKSSRLVTFSKRRTGLFKKARHLSVICDVDVAAFVISDSGKLYEFCSG
GYNSNSVELILSRYQAEERTTQEGAFEDMAFNKSTRFRTCKELLKSVRRVDEQPNEVSVS
DMTKLEEELHAALLHTRSKKTQLMVERMSTFHEQVRKLTEEKEELKQQLQVASAKKNQKD
DVDDDGGEGLDHSANSHSYYQTNLYPPQPLLTLPLFKE
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggggcggaggaaactcgaaattaagcggatccaagataagagtagcaggttagtgaca
ttttcaaagcggagaacaggattatttaagaaagcacgacacctgtccgtgatctgtgat
gttgatgtcgccgcttttgtaatctccgatagcggcaagctctatgagttctgcagcggt
ggctataatagtaacagtgtggagcttatcctttccaggtatcaggcagaagagagaacc
acccaagaaggagcttttgaagatatggcatttaacaagtccacaagattccgaacatgc
aaagagcttctaaagtcagtgagaagggttgacgaacaaccaaatgaggtctctgtgagt
gacatgacaaagttagaggaggaacttcatgctgctcttttgcatacaagatctaaaaag
actcaattgatggtggagcgtatgtcgacctttcatgaacaggtaaggaaattaactgag
gaaaaggaagaactgaaacagcagttacaggtggcatcagcaaagaagaaccagaaagat
gatgttgatgacgatggtggtgaaggtcttgaccactctgcaaatagccatagttattac
cagaccaatctatatccaccacaaccacttttaacactccctctcttcaaggagtag
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