KEGG   Lactuca sativa (garden lettuce): 111883388
Entry
111883388         CDS       T05352                                 
Name
(RefSeq) DNA repair protein RAD4
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    111883388
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111883388
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      111883388
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2 Transglut_core
Other DBs
NCBI-GeneID: 111883388
NCBI-ProteinID: XP_023735483
LinkDB
Position
2:155831943..155836978
AA seq 882 aa
MKTRNQAKRKRQPYGQDDTNKEAGDDPKANGTLANITPQKGINKFQKRVASRGLKGKDIN
FDSASKLESLSKGKEKQVKVNIGSQNIPKAELENSAPLNTDDGKSSMQVKSESEDVMADS
DWEDGPNSNLNSEIDHQNHISNNISIEIDASPGDNTAKRKPVRRASAEEKEVAELVHRTH
LLCLLARGRVIDSACNDPLIQASLLSLLPTKFLKLSEATNLTVDALTPLVNWFHSSFRVR
SSSSDKSFHSALATALGTQEGTPEEVAALSVAMFRSLNLLTRFVSILDAASLKPDADKSD
DMSPRRKTGTGVFQSSTIMVTRSNEPSTSSNKQFPPLDVDHIASIHNKQTPETSSKPSCQ
SQSQSQTISPVDDQSNERRVDLGSKRKGDLEFEMQMQMALSATATKTSEISNTDSFKKLK
KIKCEEDPSSSSSSSISTAIGSRKVGAPLYWAEVYLNGKWVHVDTINATIDGENKVEALV
AACKTSLRYVVAFNGQGAKDVTRRYCAKWYKIASHRVNSTWWDAVLAPLKDLESKTTQGI
GLSDNLRNERASLEDMELETKALTEPLPTNQQAYRSHHLYAIERWLTKYQILHPKGPILG
FCSGHPVYPRASVQILHTKEKWLREGLQLKVNELPVKVLERSVKVNKGKVTDEDDCVGPT
GTIHLYGKWQTEPLCLPHAQNGIVPKNERGQVDVWSEKCLPPGTVHLGFPRIFNIAKKLN
VDYAPAMVGFEFKNGRSYPLYNGIVVCSEFKDMILDAYGEEEERRGEEERRKSEAKALSR
WYQLLSSIVTRQRLNNRYAKPEEVSSCHKNDVGKTNDSFDHCSTSVNTQDVQKLVSLQEN
DDVAQTFEDDHEHVFVNGSLDVENSVRKKSCRCGFSIEVEEM
NT seq 2649 nt   +upstreamnt  +downstreamnt
atgaaaaccagaaatcaagccaagcgaaagcgtcaaccatatggtcaagatgacacgaat
aaggaagctggagatgatccaaaagcaaatggcactcttgctaatattacaccacagaag
ggtatcaacaagtttcagaaacgagttgcttcacgtgggttgaaaggaaaagatattaat
tttgattctgcaagtaagttggaaagtttgtcaaagggaaaggaaaaacaagtaaaagtc
aacattggttcacaaaatataccaaaggccgaattggagaattcagcacctttgaacact
gatgatggaaaaagttctatgcaagttaagtctgaatcagaagatgtaatggctgattca
gattgggaagatggacctaattcaaatttaaattctgaaattgatcatcaaaatcatata
agcaataatatttctattgaaattgatgcatcacctggtgataatactgctaaacggaag
cctgtacgtcgagcttctgctgaggaaaaggaagttgctgagcttgtgcataggacacat
ttactctgtttacttgcacgtggacgtgtgattgatagtgcttgcaatgatcctctcatt
caggcttccttattatcacttttgccaacaaagtttctgaagttatcagaagctacaaat
cttacagtagatgctttgactcctttagtcaactggttccatagtagctttcgtgttaga
agttcaagcagtgacaaatccttccattcagctttagccactgctcttggaacccaggag
gggactccagaagaggtagctgctttatctgtggcaatgttcagatcattgaatctttta
acacgttttgtatccattttagacgccgcatctttgaaaccagatgctgataaatctgat
gacatgtcaccccgaagaaaaactggtacaggggtatttcagtcctctacaatcatggtg
actcggtcaaacgaaccctctacatcttccaataaacaatttccacctcttgatgttgac
cacattgcttctattcacaacaagcaaacacctgaaacttcttcaaaaccttcatgccaa
agtcaaagtcaaagtcaaaccatctctcccgttgatgatcagtcaaatgagagaagggtt
gacttagggtcaaagagaaaaggggatcttgaatttgaaatgcaaatgcaaatggctctt
tctgcaactgcaactaaaacatcagaaatatcaaataccgattctttcaaaaaattgaaa
aaaataaaatgtgaagaagatccatcatcatcatcatcatcatcaatctctactgcaatt
ggatcaagaaaagtaggagctccattgtattgggcagaagtttatcttaatggaaaatgg
gttcatgttgacaccataaatgccaccattgatggagaaaataaagttgaagctttagtt
gctgcatgtaaaacttcattaagatatgtggttgctttcaatggtcaaggagctaaagat
gtcactcgcaggtattgtgcaaaatggtacaagatagcatcacatcgagttaattccact
tggtgggatgcagttttggcaccattaaaagacctagagtctaaaacaacccaaggcatt
ggattgtctgataatttgagaaacgaacgtgcatctcttgaggatatggagctggagacc
aaggcgttgactgagcctcttccaactaatcaacaagcgtatagaagtcatcatttatat
gcaattgaaagatggcttacaaagtaccaaattcttcacccaaaaggcccgattttaggg
ttttgttctggtcatcctgtttaccctagagcttctgtccaaatcctgcatacaaaagaa
aaatggctacgtgaggggcttcagttaaaagtcaacgagcttccagtcaaagtcttggaa
cgttctgtaaaagtcaacaaagggaaagttacagatgaagatgattgtgtaggccccact
gggaccattcatctttatggaaaatggcaaacagagcctctatgtttgcctcatgcacaa
aatgggattgttccaaagaatgaacgtgggcaagtggatgtgtggtctgagaagtgtctt
cccccaggaactgttcatttagggtttccaaggatctttaatattgccaagaagctaaat
gtcgattatgcccctgcgatggttggatttgaattcaagaatggacgatcttaccctttg
tataatgggattgtcgtgtgttctgagttcaaggatatgattctagatgcatatggagaa
gaagaagagaggaggggggaagaggagagaagaaagagtgaagcaaaagctttatcaaga
tggtatcaacttctttcatccattgtaactagacaaagattgaacaatcgatatgcaaaa
ccagaagaagtctcctcatgtcacaaaaatgatgttggaaaaacaaatgattcatttgat
cattgttcaactagtgttaatacacaagatgtgcaaaaattagtatcacttcaagaaaat
gatgatgtggcacaaacatttgaagatgatcatgagcatgtgtttgtgaatggaagtttg
gatgttgagaattctgtgaggaaaaagagttgtcgatgtgggttttcgattgaggttgaa
gagatgtag

DBGET integrated database retrieval system