Lactuca sativa (garden lettuce): 111884521
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Entry
111884521 CDS
T05352
Name
(RefSeq) PWWP domain-containing protein 1
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00270
Cysteine and methionine metabolism
lsv01100
Metabolic pathways
lsv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
111884521
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111884521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111884521
03032 DNA replication proteins [BR:
lsv03032
]
111884521
03036 Chromosome and associated proteins [BR:
lsv03036
]
111884521
Enzymes [BR:
lsv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
111884521
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
111884521
DNA replication proteins [BR:
lsv03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
111884521
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
111884521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
111884521
NCBI-ProteinID:
XP_023736601
LinkDB
All DBs
Position
9:155590846..155595026
Genome browser
AA seq
1036 aa
AA seq
DB search
MMGSDLELGDSTNPKVESESFVDGSSSENRVDSASIHLTGPSDSSTVVQGVESVVAEGSL
DSVSAEGNVSDVNNRGAGDSSKLGVSESDNKDVSSDRNHGSVKRTKNEHKKGQRRKETKS
KESVSPAYDSMLSMFDDFAANGSVATEVRSSMEGSGLGSPGHGYEVGDMVWGKVKSHPWW
PGHVFSEEFATTSVRRSKREGLLLVAFFGDSSYGWFDPSELMPFESNFAEKSRQTNSKTF
VKAVEEAMDEVSRRNALGLSCMCRSKQNFRKTDVKGYYAVDVADYEPGAVYSINAIEKAR
ASFQPSSALDFIRQLALEPNVEHVGIDLIKNKARVVSYRRAVYEEFDDTYAQAFGHELDR
PSPAKAPLSGRQVFADTSGKGKNPARSNKSKENAKKDKYLFKRREESKEILKPPQKEKEK
LPIPSSPQLSHVDDSTAIAAGDFVLQKRAPATPPPPPPPEQVTNPPILPESPSKEDTPIP
ILPESGDPSPVTTTKAESDVSGDDEKKTEEDKKVNIMENGTKKVKVSKRPAGVLSSGKPI
SPEKKKKRKKESLSSETTEIHEKDPIPFPSKTPIEEKEQEPQELKLSHVLNDLQSLALDP
FNAINKGLAIKTRQVFLKFRSLVFQKSLNSSPPPDNAATSPEENTVKLPPVKPENTISAR
PDDPTKGGRKRGPSDRQEEMAARKKKKVGDIKNLTKEKKVIKKLDDPPPAPPARKPDPGQ
GRRAAPTVLIMRFPPDGSLPSINELKATFVRFGPMDYQATRILWKSLQCRVVFKYHADAQ
EALKMAVRSGSLFGNSGVRCSLRAVADFEPPAKVKEDHQHHHHQQQSAVQLKSCLKKSGG
EDGGGGGGRGAARVKFVLDGDESHHNKNKKNGDGGGGGGGGGSSSFSSSSSSSSSSSHAT
MDFNSKNFQKTSSSLPLLPLPLPLSTSSGVGSSSGVQFTRPPLIPLAPPLIPLAPPLLPT
PTPTPRSFNYGGDMAPLPPPPPVGVGVGGKYVHNLQRPNIGQKVDVSQQMLRLMRKCNEV
VTNVRNTLGYVPYHPL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgatgggcagcgatttagaattaggagatagtacaaaccctaaggtggaatcggaatca
tttgttgatggtagtagctcagagaatagagtagattccgcatcgatacatttaactggc
ccctccgatagctctacagttgtgcagggtgttgaaagtgttgttgcagagggcagcttg
gatagtgtttcggcggaaggaaatgttagcgatgtaaataataggggagctggggattcg
agcaagttaggtgtttctgaatctgataacaaggacgtgtctagcgataggaaccatggt
agtgtaaagcgtacgaaaaatgagcacaagaagggacaacggagaaaagagacgaagtca
aaagaatcagtatcgcctgcatatgattcaatgctctcgatgtttgatgattttgctgca
aatgggagtgtggccaccgaggttaggtcatcaatggagggatcaggactgggatcgcct
ggtcatggatatgaagttggggatatggtttggggaaaagtgaagtcccacccttggtgg
cctggtcatgtattcagtgaagagtttgcaaccacttctgtgcgaagatcaaagagggag
ggtcttctcttggttgccttctttggagatagtagttatggatggtttgatccttcagaa
cttatgccatttgaatcaaattttgctgaaaagtctcggcagactaactcaaaaactttt
gtcaaagctgtggaagaggcaatggatgaggtgagtagaaggaatgcacttggtttgtct
tgcatgtgtaggagtaagcagaatttcaggaagacagatgttaaagggtattatgctgtt
gatgtagctgattatgagcctggtgctgtatactcaatcaatgctattgagaaagctagg
gccagtttccagccaagttcagctcttgattttatcaggcagctagctttggagcctaac
gttgagcatgttggtattgatcttataaagaacaaagctagggttgtttcttacagaagg
gcagtttatgaggaatttgatgacacttatgctcaggcatttggtcatgaactagatcgt
ccttctccagctaaagcccctttgagtgggcggcaggtgtttgctgacacttccggcaag
ggaaagaatccggcaaggtcaaataagtcaaaagaaaatgctaaaaaagacaaatatctc
tttaaaagaagagaagaatctaaagagatactaaaaccaccccaaaaggaaaaagaaaaa
cttccaattccatcctctcctcagctcagccacgttgatgattccaccgccattgccgcc
ggtgactttgtcctacaaaaaagagctccggcaacaccaccaccaccaccaccacccgaa
caagtcacaaaccctcccattctcccggaatcgccttcaaaagaagacacacctatacct
attctcccggaatccggcgacccttctccggtgaccaccaccaaggctgagtcagatgtt
tccggtgatgatgagaagaagacagaggaggacaaaaaggtcaacataatggaaaacggg
acgaaaaaggtgaaagtttctaaaagacccgccggagtactgagctccggcaaacccatc
tcgccggagaagaaaaagaaaagaaaaaaagaatctttatcctctgaaaccacagaaatc
catgaaaaagatccaattccttttccttctaaaacacctattgaagaaaaagaacaagaa
cctcaagaactcaagctttcacatgtactcaatgatcttcaatcactcgctcttgatcct
ttcaatgccattaacaaaggattagccattaaaaccagacaagttttcttgaaattccgc
tcacttgtctttcaaaaaagcttaaattcctcaccaccacccgacaatgccgccacgtca
ccggaggagaacactgtgaaattgccgcctgtaaagccagaaaacaccatctccgccaga
ccagacgaccccactaaaggcggcagaaagcggggcccatccgatcgccaggaagaaatg
gctgcaagaaagaagaaaaaagttggtgatataaaaaacttaaccaaagaaaagaaggtg
atcaagaagctggatgaccctcctcctgccccacctgcccgaaagcctgaccctgggcag
gggcggcgggcagcaccgactgtactaataatgaggttcccgccagatggatctctgccc
tccattaatgagctgaaggcgacattcgtgcgatttggaccaatggattatcaagcaact
cggatattgtggaagtcattgcagtgtcgggtggttttcaaataccatgcggatgctcag
gaggcgttaaagatggcggtccgaagcggcagtttgtttgggaactccggtgtcaggtgc
agcctcagggcggtggcggatttcgaaccaccagccaaagtcaaagaagaccaccagcac
caccaccaccagcagcagtcggcagttcagttgaaatcatgtctgaagaaatccggcggt
gaagacggtggtggtggcggcggcagaggggcggctcgtgtaaaatttgtgttggatgga
gatgaaagtcatcataataagaacaaaaagaatggtgatggaggtggaggtggaggtgga
ggtggttcatcttctttttcttcttcttcttcttcttcttcctcttcttctcatgcaaca
atggattttaatagtaagaattttcaaaaaacatcatcatcgttgcctcttcttcctctt
cctcttcctctttctacttctagtggtgttggtagtagttctggcgttcaatttactaga
ccaccactaataccattagcaccaccactaataccactagcaccaccgttattaccaaca
ccaacaccaacaccacgatcttttaattatggtggtgacatggcaccactaccaccgcca
ccaccagtgggtgtgggtgtggggggaaagtatgtgcacaacttacaaagaccaaatatt
ggtcagaaagtggatgtatcacaacaaatgttaaggcttatgagaaagtgcaatgaagtt
gttacgaatgtgaggaatacgttgggttatgtgccttaccaccctctttaa
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