KEGG   Lactuca sativa (garden lettuce): 111884845
Entry
111884845         CDS       T05352                                 
Name
(RefSeq) cyclin-dependent kinase D-3
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03022  Basal transcription factors
lsv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    111884845
  09124 Replication and repair
   03420 Nucleotide excision repair
    111884845
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:lsv01001]
    111884845
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsv03021]
    111884845
   03019 Messenger RNA biogenesis [BR:lsv03019]
    111884845
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111884845
Enzymes [BR:lsv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     111884845
    2.7.11.23  [RNA-polymerase]-subunit kinase
     111884845
Protein kinases [BR:lsv01001]
 Serine/threonine kinases: CMGC group
  CDK family
   111884845
Transcription machinery [BR:lsv03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     111884845
Messenger RNA biogenesis [BR:lsv03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     111884845
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     111884845
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Haspin_kinase Seadorna_VP7
Other DBs
NCBI-GeneID: 111884845
NCBI-ProteinID: XP_023736912
LinkDB
Position
4:complement(254563549..254568090)
AA seq 398 aa
MSDVDHLIAKKVADRYLKREVLGEGTYGVVYKAIDTKSGQTVAIKKIRLGKQKEGVNFTA
LREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIVLSPTDIKSYLQ
MTLKGLAFCHKKWVLHRDMKPNNLLIGPRGQLKLADFGLARIFGSPDRRFTHQVFARWYR
APELLFGAKQYGPGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKASQWPD
MIYLPDHVEYQYVPGQPLRALFPMANDDALDLLSKMFAYDPKARISAQMALEHRYFTSGP
PPTEPALLPRPPPKRESIDSKPPSDGGGGPTVLSPTRKSRRVMPHQHDHGNERSGPAPMS
LDFSVFAARPPARPTINSADRSHLKRKLDLEFQVPEED
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgtcggatgtggaccacttgatagccaagaaagtagctgatcgatacctgaaacgtgaa
gttcttggagaaggtacctatggtgtcgtctacaaagccattgatactaagagtggacaa
actgttgcaataaagaaaatccggcttggaaagcagaaagaaggggtgaattttacagct
cttagagaaataaagttactgaaagagctcaaggatccaaatataatagaacttattgat
gcttttcctcataaaggcaacttgcatcttgtttttgaattcatggagactgatcttgaa
gctgttattcgggataggaacattgttctttctcccactgatattaaatcataccttcaa
atgacattgaaaggacttgctttttgccacaagaaatgggttttgcatagggatatgaaa
ccaaataatctgttgataggacctcgtggacaactaaaacttgcagattttggtttggcg
cgtatatttggtagtcctgacagaaggttcactcaccaggtatttgctcgatggtataga
gcaccagagctattattcggagcaaaacaatatggtccgggggttgatgtttgggcagca
gcttgtatatttgctgagcttcttctacgccgcccgtttctacagggtagcagtgatatc
gaccaattgggtaaaatctttgctgcatttgggactccaaaagcttctcaatggccagat
atgatttatctgcccgatcatgttgaatatcagtatgttcccgggcagccacttcgggca
ctgtttccaatggcgaatgatgatgccttggatctgttgtccaagatgtttgcttatgat
ccaaaagctagaatttcagctcaaatggcattagaacataggtacttcacttcgggacct
ccccctacggaaccggctttgcttccacggcctccaccaaagagggagtctatagactca
aagccgccctcagatggtggtggtggtcccacagtgttatcacctacaagaaaatcaaga
agagtaatgccacatcagcatgaccatggaaatgaaagaagtggacccgcaccaatgtca
ctagatttttccgtcttcgccgcaaggccgccagctagaccgacaattaacagtgctgac
agaagccatctgaagagaaaattagatctggaattccaagtccccgaagaagattga

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