Lactuca sativa (garden lettuce): 111884845
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Entry
111884845 CDS
T05352
Name
(RefSeq) cyclin-dependent kinase D-3
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03022
Basal transcription factors
lsv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111884845
09124 Replication and repair
03420 Nucleotide excision repair
111884845
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lsv01001
]
111884845
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111884845
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111884845
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111884845
Enzymes [BR:
lsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
111884845
2.7.11.23 [RNA-polymerase]-subunit kinase
111884845
Protein kinases [BR:
lsv01001
]
Serine/threonine kinases: CMGC group
CDK family
111884845
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111884845
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
111884845
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111884845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
111884845
NCBI-ProteinID:
XP_023736912
LinkDB
All DBs
Position
4:complement(254563549..254568090)
Genome browser
AA seq
398 aa
AA seq
DB search
MSDVDHLIAKKVADRYLKREVLGEGTYGVVYKAIDTKSGQTVAIKKIRLGKQKEGVNFTA
LREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIVLSPTDIKSYLQ
MTLKGLAFCHKKWVLHRDMKPNNLLIGPRGQLKLADFGLARIFGSPDRRFTHQVFARWYR
APELLFGAKQYGPGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKASQWPD
MIYLPDHVEYQYVPGQPLRALFPMANDDALDLLSKMFAYDPKARISAQMALEHRYFTSGP
PPTEPALLPRPPPKRESIDSKPPSDGGGGPTVLSPTRKSRRVMPHQHDHGNERSGPAPMS
LDFSVFAARPPARPTINSADRSHLKRKLDLEFQVPEED
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgtggaccacttgatagccaagaaagtagctgatcgatacctgaaacgtgaa
gttcttggagaaggtacctatggtgtcgtctacaaagccattgatactaagagtggacaa
actgttgcaataaagaaaatccggcttggaaagcagaaagaaggggtgaattttacagct
cttagagaaataaagttactgaaagagctcaaggatccaaatataatagaacttattgat
gcttttcctcataaaggcaacttgcatcttgtttttgaattcatggagactgatcttgaa
gctgttattcgggataggaacattgttctttctcccactgatattaaatcataccttcaa
atgacattgaaaggacttgctttttgccacaagaaatgggttttgcatagggatatgaaa
ccaaataatctgttgataggacctcgtggacaactaaaacttgcagattttggtttggcg
cgtatatttggtagtcctgacagaaggttcactcaccaggtatttgctcgatggtataga
gcaccagagctattattcggagcaaaacaatatggtccgggggttgatgtttgggcagca
gcttgtatatttgctgagcttcttctacgccgcccgtttctacagggtagcagtgatatc
gaccaattgggtaaaatctttgctgcatttgggactccaaaagcttctcaatggccagat
atgatttatctgcccgatcatgttgaatatcagtatgttcccgggcagccacttcgggca
ctgtttccaatggcgaatgatgatgccttggatctgttgtccaagatgtttgcttatgat
ccaaaagctagaatttcagctcaaatggcattagaacataggtacttcacttcgggacct
ccccctacggaaccggctttgcttccacggcctccaccaaagagggagtctatagactca
aagccgccctcagatggtggtggtggtcccacagtgttatcacctacaagaaaatcaaga
agagtaatgccacatcagcatgaccatggaaatgaaagaagtggacccgcaccaatgtca
ctagatttttccgtcttcgccgcaaggccgccagctagaccgacaattaacagtgctgac
agaagccatctgaagagaaaattagatctggaattccaagtccccgaagaagattga
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