Lactuca sativa (garden lettuce): 111887437
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Entry
111887437 CDS
T05352
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00040
Pentose and glucuronate interconversions
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111887437
Enzymes [BR:
lsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111887437
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111887437
NCBI-ProteinID:
XP_023739373
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Position
6:44786386..44788174
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AA seq
329 aa
AA seq
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MAVVSLPYSQVDCNLRALAGQAEGFGRFAVGGLNGPLYHVTTLSDDGPGSLRAGCRKKEP
LWIVFEVSGSIELSSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGH
DIDGIQIKPNSKHIWIDRCSLKDYDDGLIDITRQSTNITISRCHFSNHDKTILIGGDASH
HGDRCMCVTIHHCFFDGTRQRHPRVRFAKVHLYNNYTRNWGIYAVCASVESQIYSQCNIY
EAGQKKVAFKYLTEKAGDKEEACTGCIVSEGDLFMAGTQAGLLAPDATSGLFHPSQHYEK
CSVEPATMELKDVLKRCTGWQQVPCPAGE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcagtagtatcactcccttactctcaagtcgactgtaacttgcgagctctcgccgga
caagcagagggcttcggtcgcttcgccgtcggtggacttaatggaccgctctaccatgtc
actactctatcagatgatggacctggttcacttcgtgctggatgtcgcaagaaagaacct
ttatggatcgtatttgaagtttcgggttccattgaactgtcatcttatctaaatgtatca
tcttacaagaccattgatggacgtgggcagaggattaagcttactggaaagggtttgagg
ctgaaagaatgcgaacatgtgattatctgcaacttggaatttgaaggaggtagagggcat
gatatagatggcattcaaatcaagcctaattcaaagcatatatggattgatcgttgtagc
ctcaaggattatgatgatgggttgattgatattacccgccaaagcacaaatattaccatt
tcccgttgtcacttttcaaaccatgacaagacaatactaattggaggtgatgcttcacac
catggagacagatgcatgtgtgtcactattcaccattgtttctttgatgggacccgccaa
aggcatccacgtgtcaggtttgccaaagtacatttgtataacaattacacaagaaactgg
ggaatatatgctgtctgcgctagtgttgaatcacagatatactctcaatgcaatatatat
gaagcaggacagaagaaggtggcttttaagtacctcactgagaaggcaggtgacaaagag
gaggcatgcacaggttgcattgtgtctgaaggtgatctgtttatggctggaactcaagct
ggcttattggctccagatgcaacaagtggcttatttcatccaagccaacactatgagaaa
tgctctgttgaacctgcaacaatggaacttaaagatgtgttgaagcgttgtacagggtgg
caacaagttccatgcccagctggcgagtaa
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