Lactuca sativa (garden lettuce): 111891429
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Entry
111891429 CDS
T05352
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111891429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111891429
03012 Translation factors [BR:
lsv03012
]
111891429
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111891429
Translation factors [BR:
lsv03012
]
Eukaryotic type
Release factors
111891429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
111891429
NCBI-ProteinID:
XP_023743250
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All DBs
Position
6:complement(179461185..179463862)
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AA seq
437 aa
AA seq
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MSDGQETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALSELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILANVKFIQEKRLIGKYFEEISQDTG
KYVFGVEDTLKSLEMGAVEILIVWENLDINRYVLKHSATSEIIIKHLNKEQEADQSNFRD
PETNAELEVQEKTSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
RSFDDLSDDGENYDSDE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatggacaagaaaccgataagaatatagagatatggaagatcaagaagcttatc
aaggcactggaagctgcaagaggcaatggtacaagtatgatctctcttattatgcctcca
cgcgatcaaatttctcgggtcacaaagatgcttggtgatgaatttggaactgcttcaaat
atcaagagcagagtgaatcgtcaatctgttttaggcgccataacatctgctcaacagagg
cttaagctgtacaacaaagttcccccgaatggacttgtgctctacactggaaccatactc
actgatgatggaaaagagaagaaggttacaatcgattttgaacctttcaaaccaatcaac
gcctccctttatctctgtgataacaagttccatacagaagctttaagcgagctcttggaa
tctgatgacaagtttggtttcattgttatggatggtaatgggacacttttcgggaccttg
agtggcaacacaagggaagttcttcacaaattcacagtcgatttaccaaagaaacacggg
agaggaggacaatctgctcttcgatttgcacgtcttcgaatggagaaacgtcataactat
gtgagaaagacagctgagctggcaacacagttctacatcaaccctgccaccagtcaacct
aatgtttctggtcttatccttgctggatctgctgatttcaaaaccgagttgagtcaatcc
gacatgtttgaccctcgtcttcaagccaaaatcttgaacgtggttgatgtttcatatgga
ggagagaatggtttcaatcaagctatcgaattgtcctctgaaatccttgctaacgtgaag
ttcatccaagaaaagcgtttgattggtaagtactttgaagagataagtcaagacactggt
aaatacgtctttggtgttgaagacactttgaaatcgttagagatgggagctgttgaaatt
ctcattgtgtgggagaatcttgacatcaatcgatacgtgcttaaacacagtgctacaagt
gaaatcatcataaagcatctgaacaaggaacaagaagctgatcagagtaactttagggac
cctgaaacaaatgctgaacttgaagttcaagaaaagacttcattgctcgagtggtttgct
aatgagtataagaaatttggttgcacacttgagtttgtgacaaacaaatcacaagaaggt
tcacagttttgtagagggtttggtggaattggtgggatacttcgttatcagcttgacatt
cgttcttttgatgatctttctgatgatggagaaaactatgattctgatgaatag
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