Lactuca sativa (garden lettuce): 111902367
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Entry
111902367 CDS
T05352
Name
(RefSeq) zinc finger CCCH domain-containing protein 46 isoform X1
KO
K14321
nucleoporin-like protein 2
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111902367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111902367
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111902367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Torus
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
111902367
NCBI-ProteinID:
XP_023753978
LinkDB
All DBs
Position
5:207772546..207775586
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AA seq
384 aa
AA seq
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MPPPHKPLCRNFQRGFCKYGAECRFLHENQQQQAKPNPFGFGTGTQNTTQSPRTDPQPQK
PNPFGFGVQNNSQTGSKPNQFKPGENKWSRFSPINAPNSSAPQKQNNQASAPNHVCTDSE
SCKRQISEDYEHETPLWKLTCYGHCKYGPCDIIGDISCEELRAAAYDDAKRGMNIQSVVE
KERSLVNSKLTEFQNLLRNPYTPPQNSTLSTQNVFSGNTPQTIQNNTPPLVSSFSQLGTT
VNSGFQMRPAAPNNIFGQVSHFQPPTQISNTPQKNPFAFGNPGAVVGPPSTQSFATTPTF
GNALSSTATTASPNLNLPRQQSSTMPFGFGQNPSPNLLPEPLLTLQITQNIQISNDNGDN
SIWFKEEWRPGEIPEEAPPEGVIC
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctccccataaaccactgtgccggaacttccagcgtggattctgtaaatatggt
gcagaatgcaggtttctacatgaaaatcaacagcagcaagcaaaaccaaatccttttgga
ttcggtactggcactcaaaacactacacaatctccgcgtactgatccccaacctcaaaag
cccaatccttttggatttggtgttcagaacaactcccaaactggatctaaacctaatcaa
ttcaagcctggtgaaaataagtggagccgattttccccaataaacgcccctaattcttca
gccccacaaaaacaaaataatcaggcttctgcacctaatcatgtgtgcacagattctgag
tcttgcaagcgtcaaattagtgaagattatgagcatgagacaccactttggaagcttaca
tgttatggtcattgcaaatatgggccttgtgatattattggtgatattagctgtgaagaa
ttacgagctgctgcatatgatgatgctaaacgtggaatgaacattcaatcagttgttgag
aaagagaggagtttagtgaattccaagttgactgaattccaaaacctacttcgtaatcct
tatacacctccacaaaattcaactctttctacccaaaacgtcttttccggaaatacccct
caaacaattcaaaataatacccctcctttggtttcaagtttcagccaattgggtacaact
gtcaattcaggcttccaaatgagaccagctgctccaaataatatttttgggcaagttagt
catttccaacctcctactcagatatcaaacacaccccagaagaacccctttgcatttgga
aatccaggtgcagtggtgggtccaccttctacacagtcatttgccaccacacctacattt
ggcaatgcattatcctctactgctactacagcttcaccaaatcttaatttgccacgtcag
caatcatctactatgccatttggttttggccaaaacccttctcctaatttacttcctgaa
ccacttctcactcttcaaattacacaaaacattcaaatttcaaatgataatggagataac
agtatatggttcaaagaggaatggaggccaggagagattcctgaggaagcacctccagaa
ggagtcatttgttag
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