Lactuca sativa (garden lettuce): 111903110
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Entry
111903110 CDS
T05352
Name
(RefSeq) protein SHORT-ROOT
KO
K27743
protein SHORT-ROOT
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111903110
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Other transcription factors
GRAS
111903110
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GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
111903110
NCBI-ProteinID:
XP_023754665
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Position
3:133468516..133470520
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AA seq
566 aa
AA seq
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MPFIDLDHLPVVLICVMSSYYDTLFRLVSLQKQPSHHHHHHHLHQHQQQHHSINSTSRTS
SSSRSSTQPPYHFNYQQGEDQEECFNFFMDEEDFSSSSSRHPHQNQYYSSQQPQTFHHQS
SGTPTPTTSTTNTNTPPPPSLSYYGFSSSEHQQSSDPNINYSYSPARDVTAEFSNSFSGN
TWSADVLLDAARAVADKNSGRLQQLMWMLNELSSPYGDTDQKLSSYFLQALFSRMTDSGD
RSYRTLTSASDKMCSFESTRKLVLKFQEVSPWTTFGHVACNGAIMEAFDGESKLHIIDVS
NTYCTQWPTLLEAIATRTDETPHLRLTTVIATKSGGGAADSGTGVQKVMREIGNRMEKFA
RLMGVPFKFHVIHHTGDLSELNLSQLGIQDDEALAINLNGTLRSVNNHRRDYLISTFRGL
NPKIITIVDEEADLDVGTDGFEFVRGFQECLRWFRVYFEALDESFQKTSNERLMLERAAG
RAVMDLIACSPAESMERRETAARWSSRLHASGFSPVSYSDEVCDDVRALLRRYREGWSMI
PSEAAAGVFLTWKETPVVWASAWKPI
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgccatttatagatcttgatcatcttcctgttgtgttaatttgtgttatgtctagttat
tatgacactctctttaggcttgtaagcctccaaaaacaaccctcccatcatcatcatcat
catcatctccaccaacaccaacaacaacatcattctatcaactccaccagtagaacttca
agcagttcaagatcttccacccaacctccatatcactttaattaccaacaaggagaagat
caagaagaatgcttcaactttttcatggatgaagaagatttctcatcttcttcctcaagg
cacccccaccaaaatcagtactactcttctcaacaaccacaaaccttccaccaccagtct
tccggtacgccgacgcccacaaccagcaccaccaacaccaacacccctcctccgccgtcg
ttgtcctactatggcttctcttcttccgaacatcaacagtcgtctgatcccaacattaac
tactcgtactctccagcgcgtgatgtcaccgctgagttctctaattccttctccggcaac
acctggtccgccgatgttctactagacgccgcccgtgcggtggcggataaaaacagcggt
cgattacagcaactgatgtggatgcttaacgagcttagttctccatatggagacactgat
caaaagctgtcgtcttatttccttcaagcgcttttcagccgtatgacggattccggcgac
cgatcttaccggactttgacgtcggcgtcggataaaatgtgttcgtttgagtcaacaaga
aaactggtgctgaaatttcaagaagtcagcccttggacgacgtttggacatgtagcttgt
aatggagcgatcatggaggcgttcgacggcgagagcaaactgcatataattgatgtaagc
aacacctactgtacccaatggccgactttgcttgaagctattgcaactcgcaccgatgaa
acaccacatctccgtcttacgacggtaatcgcaaccaaatccggtggtggcgctgcggat
tccggcaccggagtacaaaaggttatgagagagatcggaaatcggatggaaaaattcgct
agattaatgggtgtccctttcaaattccacgtaatacaccatactggagacttatccgaa
ctgaatttgagtcaactgggaatacaagacgatgaagctcttgcgattaacttaaacggc
acgttacgttctgtcaacaatcatcgtcgagattacttgatatcaacatttagaggatta
aatccgaaaatcatcaccatcgttgatgaagaagctgatttggatgtgggtacagatggg
tttgaattcgtgagaggttttcaagaatgtttaagatggtttagggtttacttcgaagcg
ctcgatgagagttttcagaaaacgagtaacgagaggctgatgctggagcgggcggcggga
cgggcggtgatggatttgatagcatgctcgccggcggagtcaatggagcggagggagacg
gcggctcggtggtccagtaggctacatgcaagtgggtttagtcctgtttcatatagtgat
gaagtgtgcgatgatgtcagggcacttctgaggaggtatagggaggggtggtccatgatt
ccgtcggaagcggcggccggagtattcttgacgtggaaagaaacaccggtggtgtgggca
agtgcatggaagccgatatga
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