Lactuca sativa (garden lettuce): 111906668
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Entry
111906668 CDS
T05352
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111906668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111906668
03012 Translation factors [BR:
lsv03012
]
111906668
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111906668
Translation factors [BR:
lsv03012
]
Eukaryotic type
Release factors
111906668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
M157_N_1
Motif
Other DBs
NCBI-GeneID:
111906668
NCBI-ProteinID:
XP_023758212
LinkDB
All DBs
Position
3:complement(240104715..240109025)
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AA seq
436 aa
AA seq
DB search
MADTHDTDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPSTSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKTLEMGAVDILIVWENLDINRYTLKNTTTGEVMIKHFNKEQEGNQKNFRD
ATTNVELEVQDKMSLLEWFANEYRKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
RSFDELSDDELYEDSE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacccacgacaccgacaaaaacatcgaaatatggaaaatcaagaaactcatc
aaagcactggaagcagcacgtggcaatggaacaagcatgatctctctcatcatgccacca
cgtgaccaagtctctcgcgtcacaaaaatgctcggagacgaattcggaacagcttccaac
atcaaaagccgcgtaaaccgtcaatccgttttaggcgcaatcacctccgcccaacaacgc
ctcaaactctacaacaaagtccctccaaacggcctcgttctctacaccggaaccatcgtc
accgacgacggaaaagaaaaaaaagtcaccatcgatttcgaacccttccgccctatcaac
gcttccttatatctctgcgataacaaattccacaccgaagcgctcaacgagcttctagaa
tccgatgacaaattcggattcatcgtcatggatggaaacggaacactcttcgggacttta
agcgggaatacacgcgaagtgctccacaaattcagcgtcgatttacccaaaaaacacggg
agaggaggtcaatcggcgttgagattcgctcgattacgaatggagaaacgacataactat
gtgaggaaaactgctgagctggcgacgcagttttatataaacccttcgactagtcaaccg
aatgtttcgggtctgatacttgcgggatccgcggacttcaaaacggagcttagtcaatcg
gatatgtttgacccgcgtcttcaggctaagatcttgaatgttgtggatgtttcttatgga
ggcgaaaacgggttcaatcaagcgattgagttgtctgctgagattcttgcgaatgttaag
tttattcaggagaaacggttgattgggaagtattttgaggagattagtcaggatactggg
aagtatgtgtttggggtggatgatactttgaagacacttgagatgggtgctgttgatata
ctcatcgtttgggagaatcttgatatcaacaggtatactctcaagaataccacaacaggt
gaagtgatgataaagcatttcaacaaagagcaagagggtaatcaaaaaaacttccgtgat
gcaaccacgaacgtcgaattagaagttcaagacaagatgtctttactcgagtggtttgct
aatgagtatagaaaattcggttgcacgcttgaatttgtgacaaataaatcgcaagaagga
tcacaattttgcagagggtttggtggaattgggggaattttacgctaccaattggacatt
cgctcattcgatgagctctcagatgatgaattgtacgaagattctgaatag
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