Lactuca sativa (garden lettuce): 111907372
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Entry
111907372 CDS
T05352
Name
(RefSeq) novel plant SNARE 11 isoform X1
KO
K08494
novel plant SNARE
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111907372
Membrane trafficking [BR:
lsv04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
111907372
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
MCPsignal
Prominin
BLOC1_2
Syntaxin_2
PigL_N
Cauli_AT
V-SNARE
TMPIT
Occludin_ELL
Vps53_N
ING
Med11
STX6_10_61_N
DUF7605
DUF5089
Motif
Other DBs
NCBI-GeneID:
111907372
NCBI-ProteinID:
XP_023758913
LinkDB
All DBs
Position
3:22282219..22285230
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AA seq
263 aa
AA seq
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MASSISAISEELGEIDGQIADIFRALSNGFQKFEKIKDSSRQSRQLEELTGKMRECKRLI
KEFDREVKDLEHTVGPDTSKILNEKKQSMVKELNSYVALKKQYASNIENKRVDLFGGPAE
GFEEDNNGLLASSMTNQQLMDNGHHMMDETDQAIERSKKVVHETVNVGTETAAALKAQTE
QMSRIVNELDSIHFSIKKASQLVKEIGRQVATDRCIMALLFLIVVGVIAIIIVKIVDPNN
KDIRDIPGLAPPAPSRKLLWIPE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcgatttcggccataagtgaggagcttggcgagattgacggacaaatagct
gatatttttcgagcactttcaaatggatttcaaaagtttgagaagatcaaagactcaagt
aggcaaagtaggcagttggaagagctcactggaaagatgcgtgagtgtaaaaggcttatt
aaagagtttgatagagaagtcaaggatttagaacatacagttggccctgataccagcaag
attctgaatgagaaaaagcaatccatggtcaaagagttgaattcctatgttgcactcaaa
aaacaatatgcaagcaacattgaaaataaacgagttgatctttttggggggcccgctgaa
ggatttgaggaggataataatggcttgctagcctcatctatgacaaatcagcaactaatg
gacaatggtcatcacatgatggatgaaactgaccaagctattgaacgttcaaagaaggtt
gtccatgaaactgtaaatgttggaaccgagactgcagcagcacttaaagcacagacagaa
caaatgagtagaattgtgaatgaacttgactcgatccatttttcaatcaagaaggcttct
caattagtgaaggaaattggtaggcaggttgcaactgatcgatgcattatggctttactc
ttcctaattgtggttggtgtcatagctatcattattgtgaagattgtggatccaaacaac
aaagacattcgggatattccaggattagccccacctgctcctagtcgaaagcttctatgg
atacctgaataa
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