Lactuca sativa (garden lettuce): 111914001
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Entry
111914001 CDS
T05352
Name
(RefSeq) adagio protein 1
KO
K12115
clock-associated PAS protein ZTL
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111914001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111914001
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
111914001
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Kelch_4
Kelch_3
Kelch_2
Kelch_5
Kelch_1
Kelch_6
PAS_9
F-box-like
PAS
PAS_3
F-box
PAS_8
Motif
Other DBs
NCBI-GeneID:
111914001
NCBI-ProteinID:
XP_023765507
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Position
7:complement(80744777..80749034)
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AA seq
610 aa
AA seq
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MEWDSSSSDLSGDEEGFLLNDGGPLPFPVDSLLQPAPCGFVVTDALEPDSPIIYVNSVFE
IITGYRAEEVLGRNCRFLQCRGPYAKRRHPLVDSTVVSEIRRCLDDGIEFKGELLNFRKD
GTPLMNRLRMTPIYGDDEVITHIIGIQFFTEVDLDLGPLQGSSTKGTIKPSDGFRSSLFS
CRLTPDQTRGSTRGLCGILQLSDEVISLKILSRLTPRDIASVGSVCRRFYEVAKNEDLWR
MVCQNAWGSETTRVLETVPGAKRLGWGRLARELTTLEAAAWRKVTVGGAVEPSRCNFSAC
AVGNRVVLFGGEGVNMQPMNDTFVLDLNSSKPEWQHVKVGSPPPGRWGHTLSCVNGSNLV
VFGGCGTQGLLNDVFVLDLDAKHPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADS
GVLLSDTFLLDLSMEKPVWREIPVTWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRS
SDVFTMDLSEDEPCWRSVTGSGMPGAGNPGGIAPPPRLDHVAVSLPGGRILVFGGSVAGL
HSASQLYILDPTEEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSEL
HELSLASSVI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggatagtagcagttctgatctgagcggagacgaggaaggatttttattgaat
gatggaggtccgctgcctttccccgtcgacagcctgcttcaaccggcaccgtgtgggttc
gttgttacggatgcgttggagcctgacagtcccattatttacgtgaattcagttttcgag
atcataactgggtatcgtgctgaagaagtcctcggtcgtaattgccgattcttgcaatgc
agaggtccatatgcaaaaagaaggcatccactggtggactcaactgttgtttcagaaatc
agaagatgtctggatgatggaatcgaattcaaaggagaactcttaaatttcagaaaagat
ggcaccccattaatgaacagattacgcatgaccccaatatacggtgatgatgaggtcatc
acccacatcatcggtatccaattcttcacagaagtcgacctcgacctgggcccactccaa
ggctcctccacaaaaggaaccatcaaaccatccgacggctttcggtccagtcttttctca
tgccggttaaccccagaccagacccgcgggtcgacccgtggactctgtgggatcctacag
ctgagtgacgaagtcatttctttaaagattctctctcggttgaccccgagagatattgct
tctgtggggtccgtttgcaggaggttttatgaggttgcgaaaaacgaggatttatggaga
atggtgtgtcagaatgcgtggggtagtgagacaactagggttctagaaactgtccccggg
gctaagaggttggggtggggccggttggctcgggagttgaccaccctcgaggcggccgca
tggcggaaggtgacagttggcggggcggtggaaccctcccggtgcaacttcagcgcgtgt
gctgtcggaaaccgggtggttctttttgggggcgagggtgtcaatatgcaaccgatgaat
gacacttttgtcctcgacttaaactctagtaaacccgagtggcaacacgtgaaagtcggc
tcaccgccacctgggcggtggggccacacgctctcgtgtgtgaacgggtcgaatttggtg
gtgttcggggggtgtgggacccaagggttgctgaacgacgttttcgtgttggatttggac
gcgaagcatcctacgtggcgggagatttcagggctggctcctccgcttccgagatcatgg
catagctcctgcaccctcgatgggacgaaactgattgtctccggtggatgtgcggattct
ggtgtgcttttaagcgatacttttttgctcgacttgtcaatggagaaaccggtttggaga
gagattccggtgacgtggaccccaccttctcgcttaggtcacactctatcggtgtatggt
ggccggaaaatcttgatgtttggtggtcttgcgaaaagcgggcccctccggttccgttcg
agtgacgtgtttactatggatttgagtgaagacgagccgtgttggaggtcggtgaccgga
agcggaatgcccggtgccggaaacccgggcggcatagcgccgccgccccggttggatcat
gtggcggttagtcttcccggtgggcggattcttgtgtttggggggtcggtggcggggctt
cattcggcttcacagctttatattctggaccccacggaggagaagccgacatggcggata
ttgaatgtgcccgggcggccgcccaggtttgcgtgggggcatagtacgtgtgtggtgggg
gggactcgggcaattgttcttggcgggcagacgggtgaggaatggatgcttagtgagctt
catgagctgtcgttagcaagttcggttatttga
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