KEGG   Lactuca sativa (garden lettuce): 111914001
Entry
111914001         CDS       T05352                                 
Name
(RefSeq) adagio protein 1
  KO
K12115  clock-associated PAS protein ZTL
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    111914001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsv04121]
    111914001
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     111914001
SSDB
Motif
Pfam: Kelch_4 Kelch_3 Kelch_2 Kelch_5 Kelch_1 Kelch_6 PAS_9 F-box-like PAS PAS_3 F-box PAS_8
Other DBs
NCBI-GeneID: 111914001
NCBI-ProteinID: XP_023765507
LinkDB
Position
7:complement(80744777..80749034)
AA seq 610 aa
MEWDSSSSDLSGDEEGFLLNDGGPLPFPVDSLLQPAPCGFVVTDALEPDSPIIYVNSVFE
IITGYRAEEVLGRNCRFLQCRGPYAKRRHPLVDSTVVSEIRRCLDDGIEFKGELLNFRKD
GTPLMNRLRMTPIYGDDEVITHIIGIQFFTEVDLDLGPLQGSSTKGTIKPSDGFRSSLFS
CRLTPDQTRGSTRGLCGILQLSDEVISLKILSRLTPRDIASVGSVCRRFYEVAKNEDLWR
MVCQNAWGSETTRVLETVPGAKRLGWGRLARELTTLEAAAWRKVTVGGAVEPSRCNFSAC
AVGNRVVLFGGEGVNMQPMNDTFVLDLNSSKPEWQHVKVGSPPPGRWGHTLSCVNGSNLV
VFGGCGTQGLLNDVFVLDLDAKHPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADS
GVLLSDTFLLDLSMEKPVWREIPVTWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRS
SDVFTMDLSEDEPCWRSVTGSGMPGAGNPGGIAPPPRLDHVAVSLPGGRILVFGGSVAGL
HSASQLYILDPTEEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSEL
HELSLASSVI
NT seq 1833 nt   +upstreamnt  +downstreamnt
atggagtgggatagtagcagttctgatctgagcggagacgaggaaggatttttattgaat
gatggaggtccgctgcctttccccgtcgacagcctgcttcaaccggcaccgtgtgggttc
gttgttacggatgcgttggagcctgacagtcccattatttacgtgaattcagttttcgag
atcataactgggtatcgtgctgaagaagtcctcggtcgtaattgccgattcttgcaatgc
agaggtccatatgcaaaaagaaggcatccactggtggactcaactgttgtttcagaaatc
agaagatgtctggatgatggaatcgaattcaaaggagaactcttaaatttcagaaaagat
ggcaccccattaatgaacagattacgcatgaccccaatatacggtgatgatgaggtcatc
acccacatcatcggtatccaattcttcacagaagtcgacctcgacctgggcccactccaa
ggctcctccacaaaaggaaccatcaaaccatccgacggctttcggtccagtcttttctca
tgccggttaaccccagaccagacccgcgggtcgacccgtggactctgtgggatcctacag
ctgagtgacgaagtcatttctttaaagattctctctcggttgaccccgagagatattgct
tctgtggggtccgtttgcaggaggttttatgaggttgcgaaaaacgaggatttatggaga
atggtgtgtcagaatgcgtggggtagtgagacaactagggttctagaaactgtccccggg
gctaagaggttggggtggggccggttggctcgggagttgaccaccctcgaggcggccgca
tggcggaaggtgacagttggcggggcggtggaaccctcccggtgcaacttcagcgcgtgt
gctgtcggaaaccgggtggttctttttgggggcgagggtgtcaatatgcaaccgatgaat
gacacttttgtcctcgacttaaactctagtaaacccgagtggcaacacgtgaaagtcggc
tcaccgccacctgggcggtggggccacacgctctcgtgtgtgaacgggtcgaatttggtg
gtgttcggggggtgtgggacccaagggttgctgaacgacgttttcgtgttggatttggac
gcgaagcatcctacgtggcgggagatttcagggctggctcctccgcttccgagatcatgg
catagctcctgcaccctcgatgggacgaaactgattgtctccggtggatgtgcggattct
ggtgtgcttttaagcgatacttttttgctcgacttgtcaatggagaaaccggtttggaga
gagattccggtgacgtggaccccaccttctcgcttaggtcacactctatcggtgtatggt
ggccggaaaatcttgatgtttggtggtcttgcgaaaagcgggcccctccggttccgttcg
agtgacgtgtttactatggatttgagtgaagacgagccgtgttggaggtcggtgaccgga
agcggaatgcccggtgccggaaacccgggcggcatagcgccgccgccccggttggatcat
gtggcggttagtcttcccggtgggcggattcttgtgtttggggggtcggtggcggggctt
cattcggcttcacagctttatattctggaccccacggaggagaagccgacatggcggata
ttgaatgtgcccgggcggccgcccaggtttgcgtgggggcatagtacgtgtgtggtgggg
gggactcgggcaattgttcttggcgggcagacgggtgaggaatggatgcttagtgagctt
catgagctgtcgttagcaagttcggttatttga

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