Lactuca sativa (garden lettuce): 111918014
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Entry
111918014 CDS
T05352
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
111918014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111918014
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
111918014
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
111918014
NCBI-ProteinID:
XP_023769431
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All DBs
Position
9:77754128..77756804
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AA seq
300 aa
AA seq
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MIKMTMSADDIFRVLEADLEFVSGHELKAMTSLVGGVYGVNPPMSCKSSSFDALQEVMEV
PKTKRLKLSAMEDAGGYSDGQQKVSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQAS
IIEGVVDYITELQQILQSLEAKKQRKVYSEVLSPRLVSSPRALSLSPQKPHLSPRPSLPI
SPTTPQPYMSRLPPPSPSPSTTFLTSDSANELVAANSRSAMAEVEVKLMGGNLLLKTCSK
RVQGQTTKVIAVLEKLALEVLQANISIVDEAMVHTFTIKIGVDCQLSAEELAEHIQHTFG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatgactatgtctgctgacgacatcttccgagttctcgaggctgatctggag
tttgtttccggtcatgaactcaaggcgatgacatctctagttggaggagtgtatggcgta
aatccaccgatgtcttgtaagtcgagttcttttgatgctttacaagaggttatggaggtg
ccaaagaccaagagactgaaactgtctgctatggaggacgccggtggttactcggatggg
cagcagaaggtatcgcatatcacggtggagaggaaccgaaggaaacagatgaacgaaaac
ttgtctgttctccgttcacttatgccttgcttctatgtcaaaaggggtgatcaagcatca
ataatcgaaggagtagttgattacatcacagaattgcaacaaattctacaatccctagag
gccaaaaaacaaagaaaagtttacagtgaagttttgagccctaggcttgtttcaagcccc
agggccttatctctcagcccccagaaaccgcatcttagccctaggccaagcctgccgatt
agccccacaaccccacaaccatacatgtccaggctgccgccaccttcaccttcaccttca
actactttcttaacttctgacagtgctaatgagctcgttgctgcaaattcaaggtcagcc
atggctgaagttgaggtcaagttgatgggtggtaatcttcttctaaagacttgctcaaag
cgggtacaaggccaaacgacgaaagtaatagcggttcttgaaaagctagctcttgaagtt
cttcaggctaacattagtattgttgatgaagccatggttcacacctttacgatcaagatt
ggagttgactgccaactaagtgcagaagaacttgctgaacacattcaacacacattcggc
taa
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