Lactuca sativa (garden lettuce): 111919272
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Entry
111919272 CDS
T05352
Name
(RefSeq) adagio protein 3
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111919272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111919272
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111919272
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_2
Kelch_5
PAS_9
Kelch_1
Kelch_6
PAS_3
PAS
F-box-like
PAS_4
F-box
PAS_8
p6
Motif
Other DBs
NCBI-GeneID:
111919272
NCBI-ProteinID:
XP_023770637
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All DBs
Position
3:complement(222734687..222737371)
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AA seq
640 aa
AA seq
DB search
MGMPIDDESDDLQRIKRLKSATDDDDYCYDDIDDEEEESGGGFSLRLGEFFNPMIPTSIV
VSDAMEPDFPIIYVNKVFESTTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVCVSEIR
RCLEEGIDFQGELLNFRKDGTPLVNRLRLAPIHGDDGIVTHVIGIQVFTEAKIDLNSISY
PVFKETHNNDVQSQSQSLSHSQSNQQVSDKFHSPNIEQQQQIECGILQLSDEVMAQDILS
RLTPRDVASIGSVCRRIRLLTKNEHVRKMVCQNAWGREVTGALEHMTNNKLGWGRLAREL
TTLEAVCWKKLRVGGTVEPSRCNFSACAAGNRLVLFGGEGVNMEPMDDTFVLNLDAVNPE
WRQVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGKQGLLNDVFVLDLDAKQPTWIQVFGAG
PPPPRSWHSSCTIEGSKLVVSGGCTDAGVLLNDTFILDLTMEKPMWREIPTSPVPPSRLG
HSLSVFGRTKILMYGGLANSGHLRLRSSEAYTMDVMDEKPEWRLLECNGFTGVGTQSAVV
PPPRLDHVAMSMPCGRVIIFGGSIAGLHSPSQVFLLDPAEEKPSWRILNVPGQPPKFAWG
HSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASRQDVDQ
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggggatgcctatagacgatgaatcagacgatcttcagaggatcaagaggctaaaaagc
gccaccgatgacgacgactactgctacgacgacatagacgatgaggaggaggagagcggt
ggtggattttcgttgaggttaggcgagtttttcaatccgatgattccgacttcaattgtg
gtttcggatgctatggaaccagattttcctataatctacgttaataaggtattcgaatcc
accaccggttatcgtgccgatgaagtccttggtcggaactgtcgtttcttgcagtacaga
gacccccgagcccaaagacggcacccgttggtggaccctgtgtgtgtatcagagatcaga
agatgtctggaagaaggaatcgatttccagggagagcttctcaatttcagaaaagacgga
actccattggtcaaccgactaagacttgctccaattcatggtgatgatggcatagtcaca
cacgtaataggcatacaagtattcacagaagccaaaatcgatctaaattccatatcctac
cctgttttcaaagagactcacaacaacgacgtccaatctcaatctcaatctctgtctcac
tctcaatctaatcaacaagtaagtgataaattccactccccaaacatcgagcaacaacaa
caaatcgagtgtgggattcttcaactttcagatgaagtaatggctcaagacattctgtct
cgattgacacccagagatgttgcttcaatcggatctgtttgtaggcggatccgcctactt
acaaagaacgagcatgttagaaaaatggtttgtcagaatgcttggggaagagaagtgaca
ggtgcattagaacatatgactaataataaattaggatggggccgtcttgctcgtgagctc
accactcttgaggctgtttgttggaagaaactaagagtcggaggtacagtcgagccttca
cgttgtaattttagcgcatgtgcagctggaaaccggcttgttttatttggtggtgaagga
gttaacatggagccaatggacgatacgtttgttcttaatcttgatgctgtcaatcccgag
tggcggcaggtgagcgtcaagtcgtccccgccagggcgatgggggcacacactttcctca
cttaatggctcctggttggtggtgtttggtgggtgtgggaaacaaggattgttgaatgat
gtgtttgttcttgacttggatgccaaacaaccaacctggatacaagtgtttggcgctggt
ccacccccgccaagatcttggcacagctcttgcaccatagaaggatcaaaattagttgtt
tcaggcgggtgcacagacgcaggagtccttctgaatgacacgtttatccttgatctgaca
atggaaaaaccgatgtggcgagaaatcccgacttcaccggtcccaccctctcgactggga
cactcgctgtctgttttcggaagaacaaaaattctcatgtatgggggtctggcaaacagt
ggtcacttaaggttaagatcaagtgaggcatatacgatggatgtaatggatgagaagcca
gaatggaggcttttggagtgcaatgggttcacaggtgttgggacccagagtgctgttgtc
ccaccgccacggcttgaccacgtagccatgagtatgccatgcgggcgggttataatattt
ggtggttccattgcggggctgcactccccttctcaggtgtttttgttggaccctgccgag
gagaaaccatcttggagaattttgaatgtgcctggtcaacctcccaagtttgcttggggt
catagtacttgtgttgttgggggtaccagggttcttgtgttgggtggtcataccggtgaa
gagtgggtgcttaatgagttgcatgagttgtgtttggcaagcaggcaggatgtggaccaa
tga
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