KEGG   Lactuca sativa (garden lettuce): 111920830
Entry
111920830         CDS       T05352                                 
Name
(RefSeq) lysine-specific demethylase JMJ17 isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lsv01009]
    111920830
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lsv03036]
    111920830
Enzymes [BR:lsv01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     111920830
Protein phosphatases and associated proteins [BR:lsv01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     111920830
Chromosome and associated proteins [BR:lsv03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    111920830
SSDB
Motif
Pfam: JmjC PLU-1 JmjN zf-C5HC2 PHD ARID KDM5_C-hel PHD-1st_NSD
Other DBs
NCBI-GeneID: 111920830
NCBI-ProteinID: XP_023772176
LinkDB
Position
3:complement(10311404..10321167)
AA seq 1845 aa
MGKSRPRAAEKRVLGQGSIVLTSGSSLAIPPAPVYTPTEEEFKDPLAYIYKIRPEAESYG
ICKIIPPKNWKPPFALDLDKFSFPTKTQAIHQLQARPPACNSKTFELEYNRFLEEQCGKK
AVKKKVVFEGKELDLCKLFNGVKRFGGYDNVVKEKKWGEVFRFVRSGGKISACSKYVLCQ
LYKEHLYDYENYYSKLDRVKEKSCKRGVQGEKKSGQQSCKRSRINEAGDNIKLQHKGKDE
EYDQICEQCRSGLHAEVMLLCDRCNKGWHIHCLSPPLARVPPGNWYCSECFNSEKDSFGF
VPGKQLTLEAFRRVADRAKKKWFGSTSASRVQLEKKFWEIVEGSVGEVEVIYGSDLDTSV
YGSGFPRAADERPSSIELNEWDEYSDSPWNLNNLPKLQGSMLRAVHHNIAGVMVPWLYIG
MLFSSFCWHFEDHCFYSMNYHHWGEPKCWYSVPGSEASAFEKVMRNSLPDLFDAQPDLLF
QLVTMLNPSVLQENNVPVYSVLQEPGNFVITFPRSYHGGFNFGLNCAEAVNFAPADWLPY
GGFGAELYQHYRKPAVLSHEELLCVVAKNDFDSNAIPYLKKELLRVYNKEKSWRERLWKN
GIISSSFMAPHEQPNFVGVEEDATCVICQQFLYLSAVGCSCRPSALVCLEHWENLCECKP
RKRHLLYRHTLSELNDLVIMMEKDTSEETTQKRNTRKLSTCTKDSPSLSKKVKGGHVTQA
QLAEEWLVRSCKILQMPYSSDAYASALKEAEQFLWAGSEMDPVRELAKNLAEAQNWAEGV
RDCLSKIELWTRRDDCKVERVKMEYVSSLLDVSPVPCNEPGHLKLKGHEEEARVLIQEIY
AALSTSSNVSIVDLETLYSKASKSAIYVKESEDLSTKLSAVKLCLQTVRNCISEKTPDVI
EVDVLNNLKSEIVELKLQVPEVSMFLDFAKRVELCQSRCTEMLKGSITLKNLEVLVQEYD
GFTVNVPELKLLRQYQSDALYWISRFNNILKNAHEREDQENVFDELICLEKDGSLLKVQV
DELLLVDVELKKACCRVKAWKVLRSKMPLESIQQVMDVATELQIGNEKVFKEVSDVLARA
VCLEEKAKHVLACEVHMSEYEDVLRMSENLCALVPSIDGVKGALLVAKSWLIKSKPYLVS
DLSVMSDADSLLKVDDLKELVLKSKLLKMCLEERSLLEDVLRNYIKWEHHACSALHDAES
LLNILDVNLSYDIVFKLGDQITKMESIMKAEYSLRFDSVVIPKLQETCAILQWCFIALNF
HAVDPTLKEVLMLLEDAEKHHVAYASRPFWRSLVDGMNWLKKALEILGPCNDNKRFDLSD
VKETLRQYKMIKISFSLILDRLLDAVKRHNVWVEEVKSFFNRSSGDRSWSLLLQLEGVGS
TDAFSCTEMEMVASQVQKVKEWKQRGRDIVGVKAGDDNLLLNALSQILDSLDRSLEVYNK
KDGCNQRRFCMFCSCESGDQELSTCSVCMECYHMQCIKPSLGGGTTQSHASAHMCPHCHI
IESGKISQLKIDAKRPELDMFVKLLSDADNLCVEIEEKVLIGQIVEKAVAYKDCLTKIVE
FSLASLGNDPSLVFSKLSTALKAVEVAGVYDGESNSKFEFALARNSWRVRASKLLQPSSS
SSQKPSIHQIRRLLKEGVAIKVPLEDNLWKRLTEIKEIGLQWALKAKEVSADSGALELHK
VFELIDKGENLAVHFDNELKLLRERSMLYCICRKPYDRIPMICCDKCEEWYHFKCIKLSW
VPKDYICPACKIDLLDEIEIDDNRCTSSSIIQQDRSNVKLKCEEEPQTPSPRPVELRREA
ESKDISSRRRSGIERLLWRNKKPFRRSAKKRIQLDIFSSFFHVHS
NT seq 5538 nt   +upstreamnt  +downstreamnt
atggggaaaagtagacctagggctgcagaaaagagggttttagggcaagggtcaattgtg
ttaacatcaggctcctcgttagctataccacctgcacctgtttacacccctacggaagag
gagtttaaggacccattggcatatatttataaaatcagaccagaagccgagtcatatggg
atttgtaaaataattcctccaaagaattggaagcccccttttgccctagatttggataaa
ttttcatttcccacaaaaacccaggccatccatcagctccaagcaaggcctccggcttgt
aactccaagacatttgaattggagtacaacagattcttggaggagcaatgcggaaaaaag
gctgtgaagaagaaagtggtttttgaaggaaaggagctggatttgtgcaagctgttcaat
ggggtgaagcggtttgggggttatgataatgttgtgaaggaaaagaaatggggagaagta
tttaggtttgtgaggtcaggcgggaagatatccgcatgttcaaagtatgtactatgtcag
ttatacaaagagcatttatatgattatgaaaactattatagcaagttggatcgggtgaaa
gagaagagttgcaagagaggagtacaaggtgagaagaaaagcggacagcaaagttgtaag
agaagtcgaatcaatgaagcaggcgataacattaaactacaacataagggaaaggatgaa
gaatacgatcagatatgtgaacaatgcagaagtgggttgcatgcagaagtaatgcttttg
tgtgataggtgtaacaagggatggcatatacactgtttgtcaccacctttggcacgggtt
ccacctggtaactggtattgctcagagtgcttcaactctgagaaggatagctttggattt
gtccctggtaaacagttgaccttggaagcttttaggcgtgtggctgatcgggcaaagaag
aagtggtttggttcaacatctgcttctagggttcaattggaaaagaagttttgggaaata
gtggaaggatctgttggtgaagttgaagttatttatggtagtgatcttgatacttctgtt
tatggtagtgggtttccacgtgcagctgatgaaagaccatcatctatagagctgaatgaa
tgggatgaatacagtgatagtccatggaatcttaacaacttgcccaagttacaaggctcc
atgcttcgtgctgtccatcataacattgctggtgtgatggtgccctggctttatattggg
atgctgttttcatctttttgttggcactttgaagaccattgcttctactccatgaattat
caccactggggagagcccaaatgttggtacagtgtccctggtagtgaagccagtgctttt
gagaaggtaatgaggaatagccttcctgatttgttcgatgcacagcctgacttgctcttt
cagctggttaccatgctgaatccatctgtcctgcaagaaaataatgttccagtttacagt
gtattacaggaacctgggaattttgttattacctttcctagatcttatcatggaggtttc
aactttggcttaaattgtgcagaagctgtgaattttgctccggctgattggttgccttat
ggtggttttggggcagagctttatcagcattatcgcaaacctgctgtgttatcccatgaa
gagttgctttgtgtggtagcaaagaatgattttgatagcaatgcgataccttacttgaag
aaggagttgcttcgggtatacaataaagaaaagagttggagagaacggctttggaagaat
ggcattattagctcttcattcatggctcctcatgagcagccaaattttgttggagtcgaa
gaggatgcgacgtgtgtcatatgtcagcagttcttgtatctgtcagctgtaggttgcagc
tgcaggccttctgctcttgtttgtctggagcactgggaaaacctatgcgaatgcaagccc
cgcaaacgccatcttctttatcgccacacactttcagaactaaatgatttggtcattatg
atggagaaggatacttctgaggaaacaacccaaaagagaaacacacgaaagctttccact
tgtaccaaggactcaccctctttatcaaagaaggttaaaggtggccatgttacacaggca
cagcttgctgaagaatggctcgtaagatcttgtaaaattcttcagatgccatattcaagt
gatgcttatgccagtgccttgaaagaagcagaacagtttctttgggctggttctgaaatg
gatccggtgcgagaactggcaaaaaacttggctgaagctcagaattgggcagaaggcgta
agagattgtctttcaaaaatcgagctgtggacacgtcgtgatgactgtaaagtggagaga
gtaaagatggaatatgtgagctctttgcttgatgtcagccctgtgccttgtaatgaacct
ggacatctgaagttaaagggtcatgaagaagaagcgagagtgctgattcaagaaatctat
gctgctctttcaacatcctccaatgtttctattgttgatttggaaaccttgtactccaaa
gcttccaagtcggctatatatgtaaaagagagcgaggatctatcaaccaagctgtcagct
gtgaagctgtgtctacaaactgtaagaaactgcatctcagagaaaactcctgatgtgatc
gaggttgatgtcctcaataacttgaagtcagagattgtagaacttaaactccaagttccc
gaagtctccatgtttttggattttgcaaagcgagttgaattatgtcaatctcgatgtact
gagatgttgaaaggttctataacactaaagaatctagaagtgcttgtccaagaatatgat
ggttttactgtaaatgtaccggagttaaaacttttgaggcagtatcagagcgacgccctt
tactggatttcacggtttaataacattttgaagaatgctcatgagcgggaggatcaagaa
aatgtttttgatgagttgatttgccttgagaaagatggatcattgttgaaagttcaagtc
gatgagttgcttcttgttgatgtggagttaaagaaggcttgttgcagggtaaaagcttgg
aaggtgctccgtagtaaaatgcctttggaatctattcagcaagtaatggatgttgccacc
gaactgcaaattgggaatgagaaggtgttcaaggaagtttctgatgtacttgctcgagct
gtgtgcttggaagaaaaagcaaaacatgttcttgcttgtgaggttcacatgtctgaatac
gaggatgttttaaggatgtcggaaaatctttgtgcacttgtaccttctattgatggtgtc
aagggagctttgttagtggcaaagtcttggttaatcaagtctaaaccatatttggtttct
gatctctctgtgatgtcggacgcagattctttgcttaaagttgatgacctgaaggagttg
gttttgaaatcaaagttactgaagatgtgtctggaagagcgatctttgcttgaagatgtt
ttacggaattatataaagtgggagcaccatgcgtgttctgcactgcatgatgccgagtca
ttgttgaatattcttgatgtcaatctatcctatgatattgtcttcaaacttggagatcag
attactaagatggagtctataatgaaggctgaatattcacttcgttttgactccgttgtc
attccaaaactacaggaaacttgtgcaattctccagtggtgctttatagcccttaatttc
catgctgttgatccaactctcaaggaagttttaatgttattggaggatgcagaaaaacat
catgttgcatatgcatctcgtcctttttggaggtcattggtcgatggtatgaattggctt
aagaaagccttagagatccttggtccatgcaatgacaataaaaggtttgatttgagtgac
gttaaagaaactttgagacaatataagatgattaagatttccttttcgttgatccttgac
cgattacttgatgctgttaagaggcacaatgtatgggtggaggaagtgaaatcttttttc
aaccgcagcagtggagatcgatcatggtctttgttactgcagcttgagggagttggaagc
accgatgctttcagttgtacggagatggagatggttgcatctcaagtacaaaaggtgaaa
gagtggaagcagagaggcagggacattgttggggttaaagcaggagatgataatctgcta
ctcaatgctctatctcagatattagatagtctagacagatctttagaggtgtataacaag
aaggatggttgcaaccaaagaaggttttgcatgttctgctcatgtgagtctggggatcag
gaactctcaacttgttcagtgtgcatggaatgctaccatatgcagtgcataaaaccaagt
ttaggaggtggcacaactcaaagtcatgcatcagctcacatgtgtccccattgccacatc
atcgagagtggcaaaatctctcagctgaaaattgatgcaaaacgtcccgagttggatatg
tttgtgaagcttctatcagatgctgataacctatgtgtcgagattgaggaaaaggtttta
attggtcaaatcgttgagaaagctgtggcatacaaagattgcttgactaagattgtagaa
ttttccttggcttctctaggcaatgacccaagtcttgttttttctaaactgtccactgct
ttaaaggcagtagaggtggctggggtgtatgatggtgaaagtaacagcaaatttgagttt
gcattagcaagaaattcatggagagttcgagcatctaaattattgcaaccctcctcctcc
tcctcacaaaagccttcaatccaccagatccgccgcctactaaaagagggtgtggctata
aaggttcctttggaagataatttgtggaagagacttacggaaataaaggaaattggtttg
caatgggcgttgaaggcgaaagaggtttctgctgattctggtgcacttgaattgcataaa
gtttttgaattgattgataaaggcgagaatttggctgtgcactttgacaacgaacttaag
ttattacgagaacgcagtatgctctactgcatctgtaggaagccatacgatcggatacca
atgatttgttgtgataaatgtgaagaatggtatcacttcaagtgcatcaagttatcatgg
gtgccaaaggattacatttgccctgcatgcaagatcgatctactcgatgagattgagatc
gatgataatagatgtacctcatcatcaataatccaacaagacaggtcaaatgttaaactg
aaatgtgaagaagagcctcagaccccgtctccaagaccagtggagttgagaagggaggca
gagagcaaggacattagtagcaggcgacgcagtggaatcgaacgcttgttatggagaaac
aaaaagccttttagaagatcagctaaaaagcgaatacagcttgacattttttcttcattt
tttcatgtacattcttaa

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