Lachancea thermotolerans: KLTH0A00638g
Help
Entry
KLTH0A00638g CDS
T01117
Name
(RefSeq) SKI complex subunit tetratricopeptide repeat protein SKI3
KO
K12600
superkiller protein 3
Organism
lth
Lachancea thermotolerans
Pathway
lth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KLTH0A00638g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0A00638g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
KLTH0A00638g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_22
TPR_19
TPR_2
TPR_16
TPR_14
TPR_1
TPR_8
TPR_11
TPR_17
TPR_CcmH_CycH
TPR_12
TPR_6
TPR_9
TPR_7
ANAPC3
TPR_Slam
Coatomer_E
ARM_TT21_N
HrpB1_HrpK
TPR_10
DUF1450
TPPII_C
Motif
Other DBs
NCBI-GeneID:
8290281
NCBI-ProteinID:
XP_002551490
UniProt:
C5DB91
LinkDB
All DBs
Position
A:complement(63363..67598)
Genome browser
AA seq
1411 aa
AA seq
DB search
MAELKQLLKDAKNALASEDYEQSIEKSKEVLNLDKNNYFAHVFLGKAFSCTGDLAQSKKH
YKAAIDMDPGNMLAWKGIFMLFRTANIAPTIVSFDEFFDLCGEYAEHLVQQQLPMVDLVN
DIRNFKNFYRDCQESYLRHMRPGTPMAERLSRHLITPQDALQGLLNIVSAEEQQQVSKLV
SRERLKISANQPDYNLKVNSIAWQVYQDSEIDELYQQLINITDDDEKRRGLESKWLEYRI
RVLKSMPADIKHHFFTKVRNMVEDMVVVDHDFLLAWQLYFEWQDYSDLDCMDVNVISKFL
KKFPKEPLAAVLYAWVCSEQSSYNSKEFYEKTFQGEDTDNSGTSSVDSINDVVEDGMDES
EKRRLQQLVDPSMEEATFGLSEDEVLLSLTENIKKTQQSIVAHRIVSHYYVSTREYESAL
HYTKAGIVLCAQSVKNMGAHLSNSKRELTLDLATTYTYFEAPKNHPTALALFEKLLTENS
DNVHAKMGKGLIAIERRNWQEAYELLKEVTERYPDNYEVLSEFAWSELHLDAPDAAIERF
KYILNNVEGSDLKVLEFRSLNHWRMAKGYVYKQHGEINAGESSEKEYIKLAFKQLVQAVK
TSENFAPGYSTLGDIYSEYYQDPTRAFKCYFKSFEMDPSDLTAARYMCEKYCGSCDWQSA
SLIAERVVKAEKSKSILQNVNWPYRVLGIAHLEKQAESESIEWFQSALRVEPADLESWLG
LGQAYYSCGRVEASVKVFEKALEVSPGNAYAHYFKALSLSKMGLYDESIEIFRELTAEHP
DEESYQVSMVEVLVEHCNVLCSQGFLTRSVAAAADAIRKIESIVLHIDYKIHGMWLSLSN
ALRVICLVQSQVHLLPLESLVNIFEVAELRNTDEIDKIDHVTLSGLLSDLEQDNVAIAAQ
FLVLSGKHAIACSDYASLPRTVRASLWYNLGIVELMAFVILKSNSHRDAAIESFKKSIEY
QSNTAEAWIGFGIASIDLNVRVAQHCFIKATALNPRETSVWYDMAILALRYNDVAFARAV
LMKSQSIAPQDSTPWFGLALASEKEGLTQDSARLFAHSFVLSNGKSKGAQLLYAKSVLKT
RIGSGDDERDIGPGQELSAVAYGLDDYLKKNPDDKFALQCAILTLERLRNYAAARKLSDR
LLDILEKRFEKAQDDSELFHFAIVKSQLARVYLGLKDYETAIESADLSLGILAEHNNEVA
EKCITSNHAVMGLASFFLDDFDQTLEHFKVLLDRPGESKQLVILVAKILYNVESEETREV
ALKELVDYINSNGPDLTVTLTIAVISLLEGIPDDMRAILSELKSLPLSDMISDRHRDIPF
LIQQLNTKLSQDCESQQQWQRTAFFFPNDSGSWGSLDKKIRARIAAGGQNKVPARKMSEF
YSSLGNLSKIQRSIFLCPWNKEALSSLKGCF
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atggcagaactaaagcagctgttaaaggatgccaagaatgcactagctagcgaggactat
gaacagtctattgagaagtcgaaagaggttctaaatcttgataaaaacaattattttgct
catgtctttcttggaaaggcattttcgtgcaccggcgacttggcgcagtctaagaagcac
tacaaggccgccattgatatggaccccggaaatatgttggcatggaaggggattttcatg
ctctttagaacagccaacattgctcccacgattgtgtcgtttgatgagttttttgactta
tgtggagaatacgccgaacaccttgtccagcagcagctgcccatggtggatctggttaac
gacatcaggaacttcaaaaacttttacagagactgtcaggaatcatatttaagacacatg
cgcccagggacaccaatggcggagcgcttgtcgcggcacctgataaccccacaggatgcc
cttcaaggtctactcaacatagtctcggccgaagagcagcaacaagtgtccaaactcgtc
agtcgggaaaggctcaaaataagtgctaaccagcctgattacaacttaaaagtaaattcc
atcgcgtggcaagtttatcaagactcagagatcgacgagctctatcaacagctcattaac
ataacagatgacgacgagaaaaggcggggtcttgagtctaaatggctagagtacagaata
agggtgcttaagtcgatgcctgcggatataaagcatcatttctttacaaaagtcaggaat
atggtcgaagatatggtggtggttgaccatgacttcctgcttgcgtggcagctttacttt
gaatggcaggactattcggacctagactgtatggacgtgaacgtcatttcaaagtttctc
aagaagtttcctaaggagcctttggcggcagtactttatgcctgggtttgttcagaacaa
tcaagttacaactctaaggagttttatgaaaagactttccaaggtgaggataccgacaat
tcgggtacttcctcagttgatagcataaacgacgtggtcgaagatggcatggacgaatct
gaaaagcgtaggctccagcagttagtggatccatcgatggaggaagcaacattcggtctg
tcggaagacgaagtccttctctcgcttactgaaaatatcaaaaagacccaacaaagtata
gtcgcgcaccgcatcgtctctcattattacgtatcaacgagggaatatgaatcagcttta
cactacactaaggcaggtattgtactttgcgcacaaagtgtcaaaaacatgggtgcacac
ctaagcaactctaaaagagaattgactttagatctggcgactacatatacctactttgaa
gcgccgaaaaaccacccaactgccctagccttgtttgaaaagcttctcacagaaaattcg
gacaatgtgcacgcaaaaatgggaaaaggtctgatagcaatcgaacgcaggaactggcaa
gaagcgtatgagcttctcaaagaggtaactgaaagatatccggacaattacgaagttctc
tcagaatttgcatggagtgagcttcatttggatgccccagatgcagccattgaaaggttc
aaatatatcctgaacaacgtcgaaggttctgacttgaaggtactcgagttcagatcattg
aaccactggagaatggcgaaaggttatgtctacaaacagcacggggaaattaatgccgga
gagagctctgaaaaagaatatatcaagcttgcatttaaacagctagttcaagccgtcaaa
acgtctgagaattttgcgcctggttattcgacattgggtgatatatattccgaatactat
caagatccgaccagagccttcaagtgttacttcaaatctttcgagatggatcctagtgat
ttgactgccgctaggtacatgtgcgaaaagtactgtggttcctgtgattggcaatctgcg
tcactgatagcggaacgtgttgtaaaagcagagaagtctaaaagcattctacaaaacgtc
aattggccttatcgcgttttaggtattgcacacctcgaaaaacaagccgaatcagagtct
attgaatggttccaatctgcgctacgtgttgagcctgctgatttggagtcttggcttggt
ctcggtcaggcatattatagctgtgggagggtggaggcatcagtcaaggtctttgagaag
gcccttgaagttagccccggcaatgcgtacgcccactacttcaaagccctttcattgtca
aagatggggctctatgatgagagcattgaaattttccgagagctcacagctgagcacccc
gacgaggaaagctaccaggtttccatggttgaagtcctggttgagcactgtaatgtgctt
tgttctcaaggctttttgacaagatcggttgctgctgctgccgatgctattcgcaagata
gagtctattgttttgcatattgactacaaaattcatggcatgtggctatcgctctccaac
gcgctcagggtgatttgtttggtacaatcacaggttcatttgttacctttggaaagcttg
gtaaatatttttgaggtggcagaacttcgcaatactgatgaaatcgataaaatagatcat
gtcacgctttcggggctgttgtccgacctcgaacaagacaacgttgcaattgctgcgcaa
ttccttgtcttgtccggcaaacatgccatcgcatgctccgactacgcttcgttgccccgg
accgtaagagcctccttgtggtacaacctaggaatagttgaactaatggcgtttgtgata
ctgaagtcaaactcccatcgggatgccgcgattgaaagtttcaagaagtcaattgagtat
caatccaacacggcagaggcttggattggttttggaatagcttctattgacctaaacgtc
agagttgcgcagcactgttttatcaaagccacagcgctgaatccgagggaaacgagtgta
tggtacgatatggctattctagccttaagatacaacgatgttgctttcgcacgtgccgtt
ttgatgaagtctcaaagcattgcgccacaagactctactccgtggtttggccttgctctt
gcgtccgagaaagaaggcttgacacaagacagtgcgcgactatttgcacattcatttgtt
ctgtcaaacgggaagtcaaaaggtgcccaattattgtacgctaagagcgtgttgaaaaca
agaattggaagcggtgatgatgagagggatataggacctggtcaggagctgagcgctgta
gcttatggcttagatgattatttgaaaaagaacccagatgacaaatttgccctacaatgc
gctatactcactcttgagagactacgcaattatgcagcggcgcgtaaactttctgaccgc
cttctggacatacttgagaaacggttcgaaaaggcacaagatgattccgagttgtttcat
tttgccattgtgaagtcgcaacttgctcgtgtctatcttggtctaaaagattacgagacg
gcaatcgaaagtgcagacttatcgttgggtattcttgccgagcacaacaacgaggtagcg
gagaagtgtattacctcaaaccatgccgtgatgggactagcttcttttttcctggatgac
ttcgatcagactctagaacacttcaaagtcttgcttgaccgcccaggggaatcaaagcaa
ctagtgatattggttgctaagattctctacaacgttgagtcagaagagactcgcgaagtt
gccctcaaggaattggtggattatattaactccaacggtccagacctgactgttacgctc
acaatcgcagtgatttcgctcttggagggtattccagatgacatgcgcgctatcttgtcg
gaactgaagagcctgcccttgagtgatatgatatctgacagacaccgcgacattccattt
ttgatccagcagctcaatacaaagctttcccaagactgcgaaagtcagcagcaatggcaa
agaactgcgtttttctttccaaatgacagtggatcctggggctcactggacaagaagata
agagcacgtatcgcagctggcggacagaataaggtccctgccaggaagatgagcgagttc
tatagcagtttagggaacttgtccaaaattcaaaggtcaatcttcctctgtccttggaac
aaggaagcactctctagcttgaaagggtgcttttga
DBGET
integrated database retrieval system
