Luteolibacter luteus: HHL09_17645
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Entry
HHL09_17645 CDS
T06562
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
luo
Luteolibacter luteus
Pathway
luo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
luo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HHL09_17645 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
luo03021
]
HHL09_17645 (rpoB)
03400 DNA repair and recombination proteins [BR:
luo03400
]
HHL09_17645 (rpoB)
Enzymes [BR:
luo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HHL09_17645 (rpoB)
Transcription machinery [BR:
luo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HHL09_17645 (rpoB)
DNA repair and recombination proteins [BR:
luo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HHL09_17645 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
BSH_YknX
RnfC_N
GlutR_dimer
Motif
Other DBs
NCBI-ProteinID:
QJE97529
UniProt:
A0A858RMD1
LinkDB
All DBs
Position
4272328..4276215
Genome browser
AA seq
1295 aa
AA seq
DB search
MAADRLQFGKIEEVIEPPNLIEVQSRSYEEFMQKDVPAGERTDSGLQAVFREVFPIKSYD
EAIELDFVTYDIEDPKITSLEALRSGESFSAALYVTFKLKDETGTKKERVYMGELPMMTR
RGTFIINGAERVIVSQLHRSPGICFETSQHLNGKILHSFRIIPDRGSWLEVQFDTNDLLY
VYLDRRRRRRKFLATTFLRALGYPTDRDIVTNFYNVESLKLKEEMDEQELGHKVPFEDIL
DGELVVAKAYEPLTIGIVRQLIALGHKQVDVIDGREDEILLKSLRKDPAKDEDSALKDIY
RKLRPGDPPTAANARALLKRLFFDPKKYDLTRVGRYKINSKLESKVGPDERIMVPEDFLG
AVRYLLKLKKGEGVIDDIDHLGSRRVRAVGELLSNQCRVGLARTERLVKERMTLFDVNIE
GMTPQKLINPKALSAVVRDFFGRSQLSQFMDQTNPLAELTHKRRLSALGPGGLNRDRAGF
EVRDVHPSHYGRICPIETPEGPNIGLINSMCTYARINEFGFIETPYRKVKNGKVSKDIEY
LSADQEEKFLIAQANNPIDKDGKFLNEKVTAREVGGEFIEVAPTDVNYMDVSPKQMVSIA
AGLIPFLEHDDANRALMGSNMQRQGVPLLVSESPYVGTGLEGKTARDSRSVVVSELDGVV
AAATAEMIVTSPDGKLPVADEKFLSDPESVKTNLDKGIMAYPLRKFMRSNAGTCINQKPI
VKKGQKIKKGDVLADGPNTQLGELALGRNVLVAFMPWNGYNFEDAIVISERVKKEDIYTS
IHIAEFDVAARDTKLGPEEITRDIPNVGEEALKNLDHDGIIRIGAEVKPGDILVGKITPK
SETELAPEERLLRAIFGEKAADVKDTSLRVPSGCIGIVQDIRVSSHGNARKRAEKVDPVE
LKKQLKKINDEHKKKADKLTDDLTEKLSDILLGEKIPLDVVNAQTGEIIIPANRKITKTL
LRKLASVHDHIEIDPSPIRNKILEIIGSFEQRFQELDTERERKLDQLEAGDDVDPGVIKE
VKVFIAAKRKLSVGDKMAGRHGNKGVVATIVPEEDMPFLADGTPVDIVLNPLGVPSRMNV
GQVLETHLGVAAKALGFKVATPIFDGIPEAKIWEFMSKAKEVDGYTWIGDGKDGTTGGKS
TLFDGRTGEAFHQPVVVGVIYMLKLGHLVADKIHARAVGPYSLVTQQPLGGKAQYGGQRF
GEMEVWALEAYGAAYTLQELLTVKSDDVQGRTRIYEAIVKGDNNLEAGTPESFNVLIKEM
QSLGLDVRPGRRGSTPGGVPSIGGVDDFSLDDLTL
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgaccgtctccaattcgggaaaatcgaggaagtcatcgaacccccgaacctc
attgaggttcagagccgctcctacgaggagttcatgcagaaggacgtcccagctggcgag
cgcaccgattccgggctccaggctgtcttccgcgaggtgtttccgatcaagagctacgac
gaagcgatcgagctcgacttcgtgacctacgacatcgaggacccgaagatcacgtccctt
gaagcccttcgctccggcgaaagcttctccgccgctctctacgtgaccttcaagctgaag
gacgagaccggcaccaagaaagagcgcgtttacatgggtgagctgcccatgatgacccgc
cgtggtaccttcattatcaacggtgccgagcgtgtcatcgtttcccagctgcaccgttcc
ccgggcatctgcttcgagacctctcagcatttgaacggcaagatcctgcattccttccgc
atcatcccggaccgtggttcttggctggaagtgcagttcgacaccaacgacctactttac
gtttatctcgaccgtcgccgccgccgccgcaagttcttggcgacgacgtttctgcgtgcc
ctcggctacccgacggaccgcgacatcgtgacgaatttctacaacgtcgagtccctcaag
ctgaaggaagagatggacgagcaggagctcggccacaaggtgcccttcgaggacatcctc
gacggcgagctggtggtggcgaaggcttacgagccgcttaccatcggcatcgtgcgccag
ttgatcgccctcggccacaagcaggtcgacgtgatcgacggccgtgaggatgaaatcctc
ctgaagtccctccgcaaggatcctgccaaggatgaggacagcgccttgaaggatatctac
cgcaagctgcgccccggcgacccgccgacggctgcgaacgcccgcgccctgctcaagcgc
ctcttcttcgatccgaaaaagtacgacctgacccgcgttggccgttacaagatcaacagc
aagcttgagagcaaggtcggtccggacgagcgaatcatggtccccgaggacttcctcggt
gcggtgcgttacctgctgaagctgaagaagggcgaaggcgtgatcgacgatatcgaccac
cttggttcccgccgcgtgcgtgcggtgggtgagcttctttccaaccagtgccgcgtgggc
ctcgcccgcacggagcgtctggtgaaggagcgcatgacccttttcgacgtgaacatcgag
ggcatgaccccgcagaagctgatcaacccgaaggcgctctccgccgtcgtgcgcgacttc
ttcggccggtcccagctttcgcagttcatggaccagacgaacccgctggccgagctgact
cacaagcgccgtctgtccgcccttggacctggtggtttgaaccgcgaccgtgccggcttc
gaagtccgcgacgttcatccgtcccactacggccggatctgtccgattgagaccccggaa
ggtccgaacatcggtctgatcaactcgatgtgcacctatgcgcgcatcaacgagttcggc
ttcatcgaaacgccgtaccgcaaggtgaagaacggcaaggtgtcgaaggacatcgagtat
ctcagcgccgaccaggaagagaaattcctcatcgcccaggcgaacaacccgatcgacaag
gacggcaagttcctcaatgagaaggtgaccgcccgtgaagtgggtggcgagttcatcgaa
gtcgccccgaccgacgtgaactacatggacgtttcgccgaagcagatggtgtccatcgct
gcaggcctgattccgttccttgagcacgacgacgccaaccgcgcactcatgggttcgaac
atgcagcgccagggcgtaccgctcctcgtttccgagtcgccgtatgtcggcaccggtctc
gaaggcaagacggcccgcgactcgcgctccgtggtcgtttccgagctcgacggtgtggtg
gctgctgccaccgcggagatgatcgtcacctcgccggacggcaagctgccggtggcggac
gagaagttcctctccgatccagagtcggtgaagaccaatctggacaagggcattatggcc
tacccgctgcgcaagttcatgcgctccaacgccggcacctgcatcaaccagaagccgatc
gtcaagaagggccagaagatcaagaagggcgacgtccttgccgacggtccgaacacgcag
ctcggcgagctggcgctcggtcgcaacgtgctggtcgcgttcatgccttggaacggctac
aacttcgaggatgccatcgtcatctccgagcgcgtgaagaaggaggacatctatacctcc
attcacatcgccgagttcgacgtggccgcccgcgacaccaagctgggtccggaagaaatc
acccgtgacatcccgaacgtgggtgaagaggccctgaagaacctcgaccacgacggcatc
atccgcatcggtgcggaagtgaagccgggggacatcctcgtcggcaagatcacgccgaag
tccgagaccgaactcgctccggaagagcgcctgctgcgcgccatcttcggtgagaaggcg
gcggacgtgaaggacacttcgttgcgcgtgccttccggctgcatcggcatcgtccaggac
atccgcgtttcctctcacggcaatgcccgcaagcgtgccgagaaggtggatccggtggag
ctgaagaagcagctcaagaagatcaacgacgagcacaagaagaaggctgacaagctgacc
gatgacctcacggagaagctttccgacatcctgctcggcgagaagatcccgctcgacgta
gtgaacgcccagaccggcgagatcatcatcccggcgaaccgcaagatcaccaagaccctg
cttcgcaagctggcctcggttcacgatcacatcgaaatcgatccgtccccgatccggaac
aagatcctcgagatcatcggttccttcgagcagcgcttccaagagctcgacaccgagcgc
gagcgcaagctcgaccaattggaagccggtgacgacgtcgatcccggcgtcatcaaggaa
gtgaaggtcttcatcgccgccaagcgcaagctgtccgtcggtgacaagatggccggtcgt
cacggtaacaagggggttgtcgccaccatcgttcccgaagaagacatgcccttcctcgcg
gacggaactccggtggacatcgtgcttaacccgctcggcgtgccttcccgtatgaacgtc
ggccaggtgcttgagactcacctcggcgttgcagccaaggccctcggcttcaaggtcgcg
accccgattttcgacggtatccccgaagcgaagatctgggagttcatgtccaaggccaag
gaagtcgatggctacacctggatcggtgacggcaaggatggcaccaccggcggtaagtcg
accttgttcgacggccgcaccggcgaggctttccaccaaccggtcgtggtcggcgtgatt
tacatgctgaagctcggccacttggttgccgacaagatccacgcccgtgccgttggtccc
tacagcctcgttacccagcagccgctgggtggtaaggcccaatacggtggccagcgcttc
ggggaaatggaagtctgggccctcgaggcctacggcgccgcctacacccttcaggaattg
cttacggtcaaatccgacgacgtgcagggccgcacgcggatttacgaagcgatcgtcaag
ggggacaacaacctggaagccggcacgccggaatccttcaacgtcctcatcaaggaaatg
cagtcccttggtctcgacgtccgccccggacgccgtggctccacgccgggaggcgtgccg
tcgatcggcggagtggacgacttctcgctcgacgatctcaccctttga
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