Lutibacter profundi: Lupro_05900
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Entry
Lupro_05900 CDS
T04235
Name
(GenBank) Holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
lut
Lutibacter profundi
Pathway
lut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Lupro_05900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lut03400
]
Lupro_05900
Enzymes [BR:
lut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Lupro_05900
DNA repair and recombination proteins [BR:
lut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Lupro_05900
RecFOR pathway proteins
Lupro_05900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
Motif
Other DBs
NCBI-ProteinID:
AMC10801
UniProt:
A0A0X8G655
LinkDB
All DBs
Position
complement(1329157..1329711)
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AA seq
184 aa
AA seq
DB search
MSLEKIILGIDPGTTIMGFGLIKIVNKKMELMQLNELSLKKYSDHYVKLKLIFERTIQLI
ETYHPDEIAIEAPFFGKNVQSMLKLGRAQGVAMAAGLSREVPITEYSPKKIKMAITGNGN
ASKEQVAKMLQNLFKIKELPKNLDATDGLAAAVCHFYNSGKVASAKNYTGWEAFVKQNGK
RVKK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
ttgagcttagaaaaaatcatattaggaatagatccaggaactaccattatggggtttgga
ttgattaagattgtaaacaaaaaaatggaattaatgcagttaaatgagctgtcattaaaa
aaatacagtgatcattacgtgaagttaaaattgatttttgaaagaaccattcaattaatt
gaaacctatcatccagatgaaatagcaatagaagcaccattttttgggaaaaatgtacag
tcaatgttaaagttaggaagagctcagggggttgctatggctgcaggtttatcaagagaa
gtgcctattacagagtattctccaaaaaaaattaaaatggccattacaggcaatggtaat
gcaagtaaagagcaagttgcgaaaatgcttcaaaatttatttaaaattaaagagttacct
aaaaatttagatgcaacagacggcttggctgcagcagtatgtcatttctacaatagtgga
aaagtagcttcagcaaaaaactatacaggctgggaagcctttgttaaacaaaatggaaaa
agagttaagaagtaa
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