Lipotes vexillifer (Yangtze River dolphin): 103069107
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Entry
103069107 CDS
T03090
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04141
Protein processing in endoplasmic reticulum
lve04210
Apoptosis
lve04217
Necroptosis
lve04218
Cellular senescence
lve04382
Cornified envelope formation
lve05010
Alzheimer disease
lve05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103069107 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
103069107 (CAPN1)
04217 Necroptosis
103069107 (CAPN1)
04218 Cellular senescence
103069107 (CAPN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103069107 (CAPN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
103069107 (CAPN1)
05022 Pathways of neurodegeneration - multiple diseases
103069107 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lve01002
]
103069107 (CAPN1)
Enzymes [BR:
lve01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
103069107 (CAPN1)
Peptidases and inhibitors [BR:
lve01002
]
Cysteine peptidases
Family C2: calpain family
103069107 (CAPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
103069107
NCBI-ProteinID:
XP_007462073
UniProt:
A0A340XKW8
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MAEEVITPVYCTGVSAQVQKQRAKELGLGRHENAIKYLGQDYDQLRAHCLQSGALFRDEA
FPPVPQSLGFKDLGPNSSKTYGIKWKRPTELFSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNDTLLHRVVPHGQSFQDGYVGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHS
AQGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWYELRKAPSDLYRIILK
ALERGSLLGCSIDISSILDMEAVTFKKLVKGHAYSVTGAKQVNYQGQMVNLIRMRNPWGE
VEWTGAWSDGSPEWNSVDAYVREQLRVKMEDGEFWMSFRDFMREFTRLEICNLTPDALKS
QRFRNWSTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEETDDPDDDDYRGRESGCS
FLLALMQKHRRRERRFGRDMETIGFAVYEVPPELMGRPAVHLKRDFFLANASRARSEQFI
NLREVSSRFRLPPGEYVVVPSTFEPNKEGDFVLRFFSEKSAGTQELDDQIQANLPDEQVL
SEEEIDENFKSLFRQLAGEDMEISVKELQTILNRIIGKHKDLRTKGFSLESCRSMVNLMD
RDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYEL
IITRYSEPDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTFDLFKWLQLTMFA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaggtcatcactccggtgtactgcaccggggtgtctgcacaagtgcaaaag
cagcgggccaaggagctgggcctgggccgccatgaaaacgccatcaagtacctgggccag
gattatgatcagctgcgggctcactgcctgcagagtggggccctcttccgtgatgaggct
ttccccccagtgccccagagcctgggcttcaaggacctgggccctaactcctccaaaacc
tatggcatcaagtggaagcgtcccacggagctgttctcaaacccccagttcatcgtggat
ggagccacccgcacagacatctgccagggagcactgggggactgttggctcctggcggcc
atcgcctcccttaccctcaatgacaccctcctgcaccgagtagttccacatggccaaagc
ttccaggatggctatgtcggcatcttccatttccagctgtggcagtttggggagtgggtg
gacgtggtggtggatgacctgctgcccaccaaggacgggaagctggtgttcgtgcactct
gcccaaggtaacgagttctggagtgctctgctggagaaggcctatgccaaggtgaatggc
agctacgaggccctttcaggaggcagcacctccgagggctttgaggacttcacaggtggg
gtcaccgaatggtacgagctgcggaaggcgcccagcgacctctaccgcatcatcctcaag
gcgctggagcgaggctccctgctgggctgctccattgatatctccagcattctggatatg
gaggctgtcaccttcaagaagctagtgaagggccacgcctactctgtgaccggggccaag
caggtgaactaccagggccagatggtgaacctaatccggatgcggaacccctggggcgag
gtggagtggacaggagcctggagtgacggctccccggagtggaacagtgtagacgcttat
gttcgggagcagctccgggtcaagatggaggacggggagttctggatgtccttccgagac
ttcatgcgtgagttcacccgcctggagatctgcaacctgacgcccgacgcgctcaagagc
cagaggttccgcaactggagcaccaccctgtacgagggcacctggcggcgggggagcacc
gcggggggctgccgcaactacccagccaccttctgggtgaacccccagttcaagatccgg
ctggaggagacggatgacccggacgatgacgactacaggggtcgggagtcaggctgcagc
ttcctgctcgccctcatgcagaagcaccgccgtcgggagcgccgatttggccgcgacatg
gagaccataggcttcgctgtctacgaggtccctccagagcttatgggcaggccggccgtg
cacctgaagcgggacttcttcctggccaatgcgtcgcgggcccgctccgagcagttcatc
aacctgcgggaggtcagcagccgcttccgcctgccacccggggagtatgtggtggtgccg
tccaccttcgagcccaacaaggagggcgactttgtgctgcgtttcttctcagagaagagc
gctgggacccaagagctggacgaccagatccaggccaatctccctgacgagcaagtgctc
tcagaagaggagattgatgagaacttcaaatccctcttcagacaactggcgggggaggac
atggagatcagcgtcaaggagctgcagaccatcctcaacaggatcatcggcaaacacaaa
gacctgcggaccaagggcttcagcctggagtcctgccgcagcatggtgaacctcatggac
cgtgacggcaacgggaagctgggcctggtggagttcaacatcctgtggaaccgcatccgg
aattacctgtcaattttccggaagtttgacctggacaagtcgggcagcatgagtgcctac
gagatgcggatggccatcgagtctgcaggcttcaagctcaacaagaagctgtacgagctc
atcatcacccgctactcggaacccgacctggctgtggattttgacaacttcgtgtgctgc
ttagtgcggctggagaccatgttccggtttttcaagactctggacacggatctggatgga
gtcgtgacctttgacttgtttaagtggttacagctgaccatgttcgcatga
DBGET
integrated database retrieval system
