Lipotes vexillifer (Yangtze River dolphin): 103074049
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Entry
103074049 CDS
T03090
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103074049 (HELZ)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
103074049 (HELZ)
3'-5' decay
Other 3'-5' decay factors
103074049 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_30
AAA_19
UvrD-helicase
ResIII
PAM2
zf_CCCH_4
PhoH
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_16
AAA_5
AAA_7
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
103074049
NCBI-ProteinID:
XP_007455342
UniProt:
A0A340X5T1
LinkDB
All DBs
Position
Unknown
AA seq
1946 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMTLKHCTEALLSLGQYSMADFTGPCPLEIESIKIESL
LYRIASFLQLKNYGQADEDCRRVLGEGLAEGDGTFQAVLCCMQLKGKLQPVSSILAKSLT
GESLNGMVTKDLTRLKILLTETETATGNVLSGYHVEDLEEGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVNTKKSHQTWTFALTCKPARMLYRVALLY
DAHRPHFSIVAISAGDSATQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KEKLVQTQGTKEKVYEATIEEKTKEYIFLRISRECCEELNLRPDYDTQVELQFQLNRLPL
CEMHYALDRIKDNGVLFPDITMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAVTTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETRILICTHSNSAADLYIKDYLHPYVEAGNP
QARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQ
LDLEPGFFTHVLLDEAAQAMECETIMPLALATKDTRVVLAGDHMQLSPFVYSEFARERNL
HVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPL
TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV
FRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDST
EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENNSLHGI
TFEQIKAQLEALELKKTYVLNPLAPEFIPRALRVQHTGNTNRLQQSPPKGKSLHHIQNDH
FQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYG
GNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPVS
IGQTQNQHQEKDQHEQSRNGKSDTNNPGPEISKIRTPEKKPTESKQMDLESNPQNRSPES
RPGVVYPKFHRKDNLNPRHINLPVPAPHAQYAVPSRHFHPLPQLPRPPFAIPQQHALSNQ
QQNNLPEQPNQMPPHPNQGVPQQNPLGQPPPQLSAACQAGPNSAFFNTPVSHRPQSPPAE
AAIPEQQPPPMLQGGHSPLRAIAQPGPILPSHLNNFTDENPPGLPVGEALDRVHGSVALE
ALRQQQVRLQQWSEHHAYLSQGSVPYPHHHHPHPHPHPHPHPHLQHLPQPPIGLHQPPVR
ADWKLPSSAEDEAETADSRFQDLIRELSNRDQSETRELAEMPPPQSRLLQYRQIQTRSPP
AVPSPPSSADHSTHFSNFSDSSRDLEVASNPAFPQRLPPQLFNSPFSLPSEHLAPPPLKC
LAPDGAWTFANLQQNRLMGPGFPYGLPPLPPRPPQTPFVHMQSHQPAVSQEPFHPLSART
VSSSSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHNNQPSF
NFSSPESWVNTTSSTPYQNIPCNGSSRTAQPRELIAPPKTGKPPEDHLKPENLEGSSSFN
YSVLQHLGQFPPLMPNKQIAESASSSSQQSCGGSKPAMSYASALRAPPKPRPPPEQAKKS
SDPLSLFQELSLGSSSGSNGFYSYFK
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgagaagtcatgtgaacaagcgtgtgaatcacttaagagacag
gactatgaaatgaccctcaagcactgcacagaggccctcctttctcttggccagtactcc
atggctgacttcacagggccgtgtccactggagatagaaagcatcaaaatcgagagtctt
ctttacagaattgcctcctttttgcagctgaaaaactatgggcaagctgatgaagattgt
aggcgtgtgctgggagaaggactggccgagggagatggtacctttcaagcagtgctttgc
tgcatgcagcttaaaggaaagctccaacctgtatccagcattcttgccaagtcactgaca
ggagagtccctgaatgggatggtaacaaaagatttgacaagactaaaaatacttctcaca
gaaacggagacagcaactggtaatgtcctctctggatatcacgtggaagacttagaagag
ggatcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggcatctgtaggtatggtgcccagtgtact
tcagcacattcccaggaagaactagcagaatggcagaaaagatatgcttcacggttgata
aaattgaaacagcaaaatgagaataaacagctctcaggcagttacatggaaaccttgata
gaaaagtggatgaattcattatctcctgagaaagtgcttagtgaatgtatagaaggagta
aaggtagagcataatcctgatctgtccgttactgtcaacaccaaaaaatctcaccagaca
tggacctttgctctcacttgtaagcctgcaagaatgctgtaccgtgtagcattgctttac
gatgctcatcgccctcattttagtatcgttgcaatatctgccggagatagtgctacccag
gtgtcacaagaagtcccagaaaactgtcaagaatggataggaggaaagatggcccagaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatcttgagtacctgatgcatgcaaaacaacagctagta
accacggctaagcgttgggattcttcttctaagactattatagattttgaacctaatgaa
actactgatttggagaagagccttcttatcagataccaaattcctctctctgctgaccag
ctatttacccagtccgttttagacaaatcattgaccaagaccaactatcagtcacggttg
catgacctcctttatattgaggagatagcccagtataaggaagtcagcaagttcaacctt
aaagtgcaattgcagattctagcaagcttcatgctcactggagtttctggaggtgcaaag
tatgctcagaatggacaactttttggccgtttcaagcttactgaaacactttctgaagat
actttggctggacggctggtgatgaccaaagtcaatgctgtttatttattaccagtccct
aaagagaagttagtacagacccagggaaccaaagagaaggtttatgaagctactattgaa
gaaaaaacaaaagaatatatatttttaaggatatccagggaatgctgtgaagaacttaat
cttcggcctgattatgacacacaggttgaacttcagtttcagttaaatcgattacccctc
tgtgaaatgcattatgcgctagacaggatcaaggacaatggggttttgtttccagacatc
actatgactccgaccataccttggagtcccaacagacaatgggatgagcagttggatcct
cggctaaacgcaaaacagaaagaggctgttctggccgttacgaccccactttcaatacag
ctgcctcctgttctcatcatcggcccctatggcaccggcaaaacattcaccctagctcag
gccgtcaagcacattctccagcagcaggagaccaggattctcatttgcacccattctaat
agtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccc
caggcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccacccagtt
gtgcatcagtactgtttgatctcaagcgcacattccacctttcagatgccacagaaagaa
gatattcttaaacaccgagtggttgttgttacattgaatacttcccagtacctctgtcag
ttggaccttgaacctgggttttttacgcacgttctattagatgaggctgcccaggccatg
gagtgtgaaaccattatgcccctagcattagcaactaaggacacacgggttgtcctggct
ggtgaccacatgcagctcagccctttcgtttacagtgagtttgccagggaaagaaacctt
cacgtttcactgcttgaccggctctatgagcattaccctgccgagtttccctgcaggatc
ctcctgtgtgagaactaccgctcccacgaagctatcatcaattacacctctgagctcttc
tatgagggcaaactgatggccagtggaaagcagccagcacacaaggatttctacccacta
accttctttacagcacgaggggaagatgtacaagagaaaaatagcacagctttttataat
aatgcagaggtctttgaagtggtggagcgtgtggaagagttaagaaggaagtggccagta
gcgtgggggaagttagatgacggcagcattggtgtggtgactccgtatgccgaccaggtg
ttcaggatacgcgctgaacttcgaaaaaagagattatctgatgttaacgtcgaaagggtg
ctaaatgttcaaggaaagcaattcagagttttgtttcttagcacagtacgtacaagacat
acttgtaaacataaacagacaccaattaaaaagaaagagcaactgctggaagattccaca
gaggacttagattatggttttctgtctaactataagcttctcaatactgccatcacaaga
gcacagtccctggttgccgtggtgggtgatcccattgctctgtgctctattggaagatgc
aggaaattttgggagcggtttattgccctgtgtcatgaaaataatagcctacatggaatc
acttttgaacagatcaaagcgcagctagaggctttagaactaaagaagacatatgtgttg
aatccactggcacctgaatttatcccccgggctctgagagtgcagcacacgggaaatacc
aacagattgcagcagtcaccccccaaggggaaaagcctccatcatatccagaatgatcat
ttccagaatgatggaattgttcagcccaatccttctgtgcttattggcaaccctattaga
gcatatacccctccacctcctcttggacctcacccaaatttggggaaatctccaagccct
gttcaaagaatagatcctcacactgggacaagtattctttatgtacctgccgtctatgga
gggaatgtagttatgtccgtgcctttacctgtaccatggacaggataccagggtaggttt
gcagttgatcctcgaatcattacacaccaggcagccatggcctacaatatgaacctctta
cagacacatgggcgggggtctcctataccttatggccttgggcatcacccacctgtcagc
atagggcagacgcaaaaccagcatcaggagaaggaccaacacgagcagagtcgaaacggt
aaaagtgatacaaataatcctggacctgaaattagtaagattcggacaccagagaaaaag
cctacagaatcaaaacagatggatttggaatcaaatccacagaacagaagtcctgaatca
cgtcctggtgttgtttatcccaaatttcatcgcaaagacaatctcaacccaagacacata
aatctccctgttcctgctccccatgcacagtatgcagtccccagtcgccattttcatcca
cttccccagctgccaagaccaccgtttgcaattccacagcagcacgccttgtcaaatcaa
cagcagaataatttgcctgaacaaccaaatcaaatgccgccccacccgaatcagggagtc
ccgcagcagaatccgctgggtcagccgcctcctcagctttctgctgcctgtcaggcaggc
cccaacagtgctttttttaatactccggtttctcatcgaccacagtcccctcctgcagag
gctgcaattcctgagcagcagccccctcccatgctgcaggggggccacagtcctctgcga
gccattgcgcagcccggccccattcttccttcacatctgaataacttcactgacgagaac
cccccaggactgcctgtaggagaggctttagatcgtgtgcatgggagtgtggctctggaa
gcattacggcagcagcaggtgcggttacagcagtggagtgagcatcacgcctatctcagc
cagggcagtgttccttacccacaccatcaccatcctcaccctcaccctcaccctcaccct
caccctcacctccagcatcttccccagccgcccattggattacatcagccaccagtgaga
gcagactggaagctccccagcagtgccgaagatgaagcagaaacagctgactcaaggttt
caggacttaatcagagaactgtctaatcgtgatcaaagtgaaacacgggaactagctgag
atgccgccacctcaatcaagacttttgcaatatagacaaattcagaccaggagcccacca
gcagtcccctcgcccccgtccagtgcagaccacagcacccacttttccaacttcagtgac
agcagcagagacctcgaagtagccagcaacccagcatttccacagcgcctgccgccgcag
ctgttcaattcgcctttctcgttgccgtctgaacacctcgcccctcctcccttgaaatgc
ctggcacctgatggagcatggacttttgccaacttacagcagaatcgcctgatggggccg
ggttttccctatggcctacctccactgccgcccaggccaccgcagaccccttttgtgcac
atgcagagccatcagcctgctgtcagccaagagcccttccacccgctgtcggctcgcacg
gtgtcgtcctcttcgctccccagcttagaagagtatgaacccagaggacctggtcggccc
ttgtaccaaagaagaatctcatctagctcagtccagccttgttctgaagaagtaagcact
cctcaagacagccttgcccagtgtaaagagcttcaggaccataataaccaaccttctttc
aacttttcctccccggagtcctgggtaaacaccacctcatctaccccctatcagaacatt
ccgtgcaatggatccagcaggacagctcagcccagagagttgatagctccgcccaagacc
ggcaaaccccctgaggatcatctgaagcctgaaaacctcgaggggtccagttccttcaat
tacagcgtcctgcagcatctcggccagttccccccactcatgcccaacaagcagatcgcg
gagtcggccagcagcagcagccagcagagctgtggaggcagcaagcccgccatgtcgtac
gccagcgctctgcgggccccgcccaagcccaggcccccgccggagcaggccaagaagagc
agcgaccctctgtctctgttccaggaactcagcctggggagctcatcgggcagcaatggc
ttttactcctattttaaataa
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