KEGG   Lipotes vexillifer (Yangtze River dolphin): 103082203
Entry
103082203         CDS       T03090                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    103082203 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lve03400]
    103082203 (TDP1)
DNA repair and recombination proteins [BR:lve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     103082203 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 103082203
NCBI-ProteinID: XP_007471955
UniProt: A0A340YKD7
LinkDB
Position
Unknown
AA seq 603 aa
MSQEGNYGRWTISSSDESEEEKPRLDEPSTSFLPHAEQGAASELKYTCSEARKAAHRRKI
TPMKFSSTDSVSEASPPKRQKGGSQEDLGWCLSSSEDELPPETQQKQAKDTGVKEEKGLP
SPRDGAVPGAGHHSPSAGHGLETSGEGQDIWDMLGKGNPFQFYLTRVSGIKPKYNSGALH
IRDILSPLFGTLVSSAQFNYCFDVDWLVKQYPPEFRKKPILLVHGDKREAKAHLHAQAKP
YENIALCQAKLDIAFGTHHTKMMLLLYEEGIRVVIHTSNLIHADWHQKTQGMWLSPLYPR
IVHGTHRSGESTTHFKADLISYLMAYNTAPLKEWIDTIQQHDLSETNVYLIGSTPGRFQG
NQKDNWGHFRLRKLLKEHASSIPKAESWPIVGQFSSVGSMGADESKWLCSEFKESLVTLG
KESRTPGSAVPLHLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYFHKWSADTS
GRSNAMPHIKTYMRPSPDFSELAWFLVTSANLSKAAWGALEKNGAQLMIRSYELGVLFLP
SAFGLDSFRVKQKFFSGSQEPTASFPVPYDLPPELYGSKDRPWIWNIPYVKAPDTHGNMW
VPS
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgtctcaggaaggcaattacgggaggtggacgatatccagtagtgatgaaagtgaggag
gaaaagccaagactggatgagccatctacctcttttctcccgcacgctgagcagggagca
gccagtgagctaaagtacacctgttccgaggctcggaaagctgcccacaggaggaagatc
acacccatgaaattcagcagcacagattccgtttcggaagcttcacctcccaaaaggcag
aagggcggttcccaggaagacctgggctggtgtctctccagcagtgaggatgagctgccg
ccagagacgcagcagaagcaggctaaggacacgggggtcaaagaggagaaaggcctccct
tctcccagagatggtgctgtcccaggagctgggcatcacagcccctcggccggccacggg
cttgaaacgtcaggggaaggccaggacatctgggacatgctgggtaaagggaaccccttc
caattttacctcactagagtctccggaattaagccaaagtataactcgggagccctccac
atcagggatattttatctcctctatttgggacacttgtttcttcagctcagttcaactac
tgctttgatgtggactggctcgtaaaacagtatccaccagagttcaggaagaaaccaatc
ctgctcgtgcatggcgacaaacgcgaagcaaaggctcacttacatgcccaggcaaagcct
tatgaaaacattgccctctgccaggcaaagttggatattgcatttggaacacaccacacg
aaaatgatgctactgctgtacgaagaaggcatccgggttgtcatacacacctccaacctc
attcacgccgactggcaccagaaaacacaaggaatgtggttgagccccttgtacccacga
atagtccatgggacccacagatctggagaatcaaccacacactttaaagctgacctcatc
agctacttgatggcttataacaccgctcccctcaaggagtggatagataccatccagcag
cacgacctctcagaaacaaatgtttaccttattggctcaaccccaggacgctttcaagga
aatcagaaagataattggggacattttaggcttaggaagcttctgaaagagcatgcctcg
tccatacctaaagcagagtcctggcctatagtaggtcagttctcaagcgttggctccatg
ggggccgatgaatcaaaatggttgtgttctgagtttaaagagagcttggtgacactgggc
aaagaaagcaggaccccaggaagtgctgttcctcttcatctgatctatccttcagtggaa
aacgtgcggaccagcttagaaggatatccagctgggggctctcttccctatagcatccag
acggcggagaaacagaattggctccattcctattttcacaaatggtcagctgacacgtca
ggccgcagcaatgccatgccacatattaagacatatatgagaccctctccagacttcagt
gaacttgcgtggttccttgtcacaagcgccaatctgtccaaggccgcctggggagcgtta
gagaagaacggcgcccagctgatgatccgctcctatgagctcggcgtccttttcctccca
tcagcatttggcctggacagtttcagagtgaaacagaaattcttctcagggagccaggag
ccaacagcctcctttcctgtgccgtatgacctgcctccagaactgtatggaagtaaagat
cggccctggatttggaacattccttatgtcaaagcaccagatacacatgggaacatgtgg
gttccctcctga

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