Lipotes vexillifer (Yangtze River dolphin): 103083164
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Entry
103083164 CDS
T03090
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04360
Axon guidance
lve04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
103083164 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
103083164 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lve04040
]
103083164 (TRPC4)
Ion channels [BR:
lve04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103083164 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
Motif
Other DBs
NCBI-GeneID:
103083164
NCBI-ProteinID:
XP_007447240
UniProt:
A0A340WJR2
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCVDPLGRTALLIAIENENLELIELLLNCNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLLEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNIISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGVRTQHRRAADNLRRHHQYQEVMRNLVK
RYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTVQSAQGTKDSSNSA
DSDEKSDNEGSSKDKKKNFSLFDLTTLIHPRSAAIASERHTISNGSALVVQEPPREKQRK
VSFVTDIKNFGLFHRRSKQHAAEQNANQIFSVSEEVTRQQAEAPLETNIQLESRGLASRG
DLNIPGLSEQCILVDHRERNTDSLGLQVGKRVCSFKSEKVVVEDTVPIIPKEKHAKKEDC
GVDYDANLTDMVTPEDYVTTRL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctattacaaaagaaatgttaatgccccgtacagagaccgcatccctctc
aggatagtccgagcagaatcagagctctcaccgtccgagaaagcctacttgaacgctgtg
gaaaagggagattatgcaagtgtcaagaaatccctagaggaagctgaaatttattttaaa
atcaatattaattgcgtcgatccacttggaagaactgctctcctcattgcaatcgaaaat
gagaacttggagctcatagaactactcttaaactgtaacgtctatgttggagatgctcta
ttacacgccatcaggaaagaagttgtcggagctgtagagctgttactgaaccacaagaag
cccagtggagaaaaacaggtgcctcccatactccttgataagcagttctctgaattcact
ccggacattacacccatcattttggcagcccatacaaataattatgagataataaaactt
ttggttcagaaaggcgtctcggtgcccagaccccacgaggtccgctgcaactgtgtcgaa
tgcgtgtccagctcggatgtggacagtctccgccactcccgctccagactcaacatctac
aaggccctggccagcccctctctcatcgccctgtccagtgaagacccttttctcacagcc
tttcagttaagttgggagctccaggaactgagtaaggtggaaaatgaattcaagtcagag
tatgaggagctgtcacgacagtgcaaacaatttgctaaggacctgctggatcagacaaga
agttcccgcgagctggaaatcattcttaattaccgcgatgacaacagtctcctagaagaa
caaagtggaaatgatctcgcgagactcaaattggccattaagtaccgtcagaaagagttt
gttgctcagcccaactgtcaacagctgctggcatctcgctggtacgatgagtttcccggc
tggaggagaagacactgggccgtgaagatggtgacgtgcttcataataggacttcttttt
cccgtcttctctgtgtgctaccttatagctcccaaaagcccccttggactgttcatccga
aagccatttatcaagttcatctgccacacagcatcctatttgacttttttgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtcgagtggatgatattaccatgggtcctgggttttatatggggagaaattaaacaa
atgtgggatggtggacttcaagattacatccacgattggtggaatctaatggattttgtg
atgaactccttatatctagcaacaatctccttgaaaatcgttgcatttgtaaagtacagc
gctcttaatccacgagagtcttgggacatgtggcatcccacgctggtggctgaagcttta
tttgctattgcaaatatattcagttccctgcgactgatctcactgtttactgcaaattct
cacctggggcctctgcaaatatctctgggaagaatgctcctggacattttgaagtttcta
ttcatctactgccttgtgttgctagcatttgccaatggcctaaatcaattgtacttctat
tacgaagaaacaaaagggttaagctgcaaaggcatacgatgtgaaaagcagaataatgca
ttttcaacgttatttgagacactccagtccttgttttggtcaatatttgggctcatcaac
ttatatgtgaccaatgtcaaagcgcagcatgaattcaccgagtttgttggtgccaccatg
tttgggacatacaacatcatctctctggttgtcctacttaacatgttaatagctatgatg
aataattcttaccaacttattgctgaccatgcagatatagaatggaaatttgctcggaca
aagctttggatgagttattttgaagaaggaggtaccctgcctactcctttcaatgtcatc
ccaagccccaagtctctctggtacctgatcaaatggatatggacacacctgtgcaagaaa
aagatgagaagaaagccagaaagttttggaacaataggggtaaggacacagcataggcgg
gctgctgataatttaagaagacatcaccaatatcaagaggttatgaggaacctggtaaag
cgatacgtggctgcaatgattagagacgccaaaactgaagaaggtctgactgaagagaac
tttaaggaactgaagcaagacatttctagcttccgctttgaagtcctggggttactaaga
ggaagcaaactctctacggtccaatctgctcagggcacgaaggattcttctaactccgca
gactcggatgagaagagtgataacgaaggtagtagcaaggacaagaaaaagaactttagc
ctcttcgacttaaccaccctgattcacccacgatcagcagcgatcgcctccgaaagacac
accatcagcaacggctccgccctggtggtgcaggagccaccgagggagaagcagagaaaa
gtgagttttgtgaccgatataaaaaacttcgggttatttcatagacgatcaaaacaacac
gctgccgagcaaaatgcaaaccaaatcttctccgtttcggaagaggtgactcgtcaacaa
gctgaagcaccactagagacaaacatccaactggaatctcgagggttagcttcccggggt
gacttgaacatcccaggtctcagcgaacagtgtatattagtagatcatcgagaaagaaat
acggattccctgggtttacaggttggcaagagagtgtgctcattcaagtcggagaaggtg
gtggtggaggacacggttccaatcataccaaaggagaaacacgcaaagaaagaggactgc
ggcgtagactatgatgcaaacctcacagacatggtcacccccgaagattacgtgaccaca
agattgtga
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