Lipotes vexillifer (Yangtze River dolphin): 103083485
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Entry
103083485 CDS
T03090
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04151
PI3K-Akt signaling pathway
lve04510
Focal adhesion
lve04512
ECM-receptor interaction
lve04820
Cytoskeleton in muscle cells
lve04974
Protein digestion and absorption
lve05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103083485 (COL9A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103083485 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103083485 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103083485 (COL9A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103083485 (COL9A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
103083485 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lve00535
]
103083485 (COL9A2)
Proteoglycans [BR:
lve00535
]
Extracellular matrix (ECM) proteoglycans
Others
103083485 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
103083485
NCBI-ProteinID:
XP_007453815
UniProt:
A0A340X3U2
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MTPAAARRSLLVLLQVLGLALAQIRGPPGERGPPGPPGPPGPPGVPGSDGIDGDKGPPGK
AGPPGPKGEPGKAGPDGPAGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFA
GPPGPAGPVGLPGEMGVTGPKGDPGPEGPAGPPGPPGKPGRPGTIQGLEGSADFLCPTNC
PAGVKGPPGLQGVKGHPGKRGLLGDSGRQGKPGPKGDVGASGEQGIPGPPGPQGVRGYPG
MAGPKGEMGPHGYKGMVGSIGAAGSPGEEGPQGPPGRAGEKGDVGSQGIQGPQGITGPKG
ATGPPGIDGKDGTPGTPGTKGSAGQVGRPGNPGHQGLVGVPGQPGTKGGPGDKGEPGRQG
FPGVSGSPGKDGEPGPRGEIGPQGIMGQKGDHGERGPVGQPGPQGRQGPKGEQGPPGIPG
PQGLPGIKGDKGFPGKTGPRGGVGDPGVAGLPGEKGEKGESGVPGPKGQQGVRGEAGYPG
PSGDAGVPGVQGYPGPPGPRGLAGNRGLPGQPGRQGVAGRDASDQHIEDVVLKMLQEQLA
EIAVSAKREALGATGMMGLPGPPGPPGYPGKQGPIGHPGPRGIPGIVGAVGQIGNTGPKG
KRGEKGDRGEVGRGHPGMPGPPGIPGLPGRTGQAINGKDGDRGVPGAPGEAGRPGLPGPM
GLPGFCEPAACLGASAYTSARLTEPGSIKGP
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgcggccgcccgccgcagcctcctggttctcctgcaggtgctcgggctcgcc
ctggcgcagatcagaggcccaccaggagagcgggggcccccgggccccccgggccccccg
gggccaccgggagtgcctggatccgacggaatcgacggtgacaaggggcccccggggaaa
gctggacctccgggacctaagggagagcctggcaaagcagggccagatgggccagccggc
aagcccgggattgacggtctaactggagccaagggggagcctggtcccatggggatccct
ggagtcaagggccagcctgggctcccaggtccccccggcctgccgggccctggcttcgcc
ggacctcctggaccagctggacctgttggcctccctggtgagatgggagtcacgggcccc
aagggggatcctggaccagagggaccagcagggcccccggggccccctgggaaaccgggc
cgcccaggaaccattcagggtctggaaggcagcgcggacttcctgtgtccaaccaactgt
ccagcgggcgtgaaagggcccccggggctgcagggagtgaaggggcatcctggtaagcgc
gggcttctgggagattccggccgccaggggaagccgggtcccaagggagatgtgggtgcc
tctggagagcaaggcatccctggaccgccgggtccccagggcgtcaggggctacccgggc
atggcgggacccaaaggagagatgggtcctcacgggtacaaaggcatggtgggctccatc
ggcgccgccgggtcaccaggtgaggaaggtcctcaggggccaccaggccgagctggggag
aaaggtgacgtgggcagccaaggtatccaaggaccccagggaataacaggcccgaaggga
gcgaccggcccaccaggcattgacggcaaggacgggaccccaggcacacctggcacgaag
ggcagtgcaggacaggtggggcggccaggaaacccgggccaccagggcctagtgggtgtg
cccggccagcctggaacaaaaggaggccctggagacaagggtgagccaggccggcaaggt
ttcccaggagtctctggttcccccgggaaggatggagagccagggcctcgaggagaaatc
ggtccccagggcatcatggggcagaagggtgaccacggtgagagggggccagtggggcag
ccaggccctcaaggccgacagggccccaagggggaacagggtccccccggaattccaggg
ccccaaggcttgccaggcatcaagggagacaagggcttcccagggaagaccgggccccgc
ggcggagtgggcgacccgggggtggctggcctcccaggagagaaaggcgagaagggcgag
tctggcgtgccggggcccaagggacagcaaggagtccgcggagaagccggctatccgggc
cccagcggggatgcaggcgtcccgggggtgcagggctaccccgggcccccgggccctcga
ggactggctggaaaccgaggcttgcccggacagcccgggaggcagggcgtggcgggccga
gatgccagtgaccagcacattgaggatgtggtgctgaagatgctgcaagagcaactggca
gagatagctgtgagtgccaagcgggaggctctgggtgcgaccgggatgatgggtctccca
ggaccccctgggcctcctgggtacccaggcaaacagggacccattgggcaccctggccct
cggggcattcctggcatcgtgggagccgtgggtcagattggcaacaccgggcccaaggga
aaacgtggagagaagggtgataggggagaagttggacgagggcatcccgggatgcctggg
cccccagggatcccaggactgcctggccggaccggccaggcaatcaacggcaaagatgga
gatcgaggggtcccaggggccccaggagaggcaggccgacctggcctgccaggccccatg
gggctgccaggattctgtgagcctgcggcctgccttggagcctcagcctacacgtctgca
cgcctcacagagcctggatccatcaaggggccatga
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