Lipotes vexillifer (Yangtze River dolphin): 103085976
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Entry
103085976 CDS
T03090
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04110
Cell cycle
lve04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103085976 (SMC1B)
04114 Oocyte meiosis
103085976 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lve03036
]
103085976 (SMC1B)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
103085976 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
103085976 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
ATG16
Motif
Other DBs
NCBI-GeneID:
103085976
NCBI-ProteinID:
XP_007454151
UniProt:
A0A340WYK4
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MGRLELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIANLRVKT
IQELIHGAHIGKPVSSSASVKIVYVEESGEEKTFARTVRGGCSEYYFDDSPVSRSVYITE
LEKIGIIVKARNCLVFQGTVESISVKKPKERTQFFEEISTSGQLIGEYEEKKRKLQKAEE
DAQFNFNKKKNVAAERKHAKLEKEEAERYQSLLEELKKNKIQLQLFQLYHNEKKISFLNS
ELDRVNKDLSVTKESLSSHENIVKAKKKEHGMLSRQLQQTEKELKSLEALLNQKRPQYIK
AKENTSHHLKKLDVAKKSIKDSEKQCSKQEDDIKALETELVDLDGAWRSFEKQIEEEILL
KGRDIELEASQLDQYKELKEQVRKKVAIMTQQLEKLQWEQKADEERLAYEKRRHGEAQEN
LKQIKGQIEDHKKRIEKLEEYIKTCMNFLKEKKQQEETLVDEIEKTKSRMSEVNEELNLI
RSELQNAGIDSHEGKRQQKRAEVLEHLKRLHPDSVFGRLLDLCHPIHKKYQLAVTKLFGR
YMVAIVVASEKVAKDCIQFLKEERAEPETFLALDYLDIKPINERLREIKGCKMVIDVIKT
QFPQLKKVIQFVCGNGLVCETVEEARHIAFNGPERRKTVALDGTLFLKSGVISGGSSDLK
YKARCWDEKELKNLRDRRTQLIQELKDLMKTLRKEADLKQVQTLVQGTHTRLKYSQSELE
MIKKKHLAAFYQEQSQLQSELLNIESQCTMLSEGIKERQRRIEEFEGKIHKVEDDIFQHF
CEEIGVENIREFENRHVKQQQEIDQKRLEFEKQNTRLNVQLEYSRNQLKKKLNKINTLKE
TIQKGREDIDNLKKAEENCLKIVDELMEKRQQLKDIVVTQNTNAEKVQAQMEEGRKRFLA
ADREVGKRQKEVVILQTSLEQKRLEKHNMLLDCKVQDIEIILLLGSLDDIIEVELGPEAE
GTQATMDMYEKEAAIEIDYSSLREDLKALQSDKEVEAHLRLLRQQIASQEDVLLRTAAPN
LRAPENLKTVRDKFQEYTDAFEASRKEARTCRQEFEQVKKRRYNLFSQCFEHISVAIDQI
YKKLCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTQEQFQMIIISLKEELYCKADALIGIY
PEHDDCMFSRVLTLDLSQYPDTEDRESSRRSVRMQNAPVL
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtttggagctgctgcttgtggagaactttaagtcgtggcggggccgccaggtc
ataggccccttcaggaggttcacctgcatcattggccccaacggctccggaaaatctaat
gtaatggatgcacttagttttgtaatgggagaaaaaatagctaatttaagagtgaaaact
attcaagaacttattcatggagcacatattggaaaacctgtttcttcttctgcaagtgta
aaaattgtatacgtggaagaaagtggagaagagaaaacatttgcaaggactgtccgaggg
ggatgctcagaatattattttgatgatagtcctgtgagtcgttctgtttatatcacagag
ttagaaaagataggcataatagtcaaagcacggaactgtctagtttttcagggaactgtg
gagtcaatttcagtgaaaaaacccaaagaaagaacgcagttttttgaggaaatcagcact
tcaggacagcttataggagaatatgaggaaaagaaaagaaagttacagaaagccgaagaa
gatgcacagtttaattttaataagaaaaaaaatgtagctgcagagcgtaaacatgcaaaa
ttagagaaggaagaggcagaacgttaccagagtctccttgaagaactgaaaaaaaacaag
atacaactgcagcttttccaactgtatcacaatgagaaaaaaatttctttcctaaacagt
gagttagaccgtgtgaataaggatttgagtgtcacaaaagagtctctttctagtcatgaa
aacatagttaaagccaagaagaaggaacatggaatgttaagcagacaactgcaacaaaca
gaaaaagaattaaaatctcttgaagcacttttaaatcagaagaggcctcaatacattaaa
gctaaagaaaacacttctcaccacctcaagaagttagatgtggctaagaaatcaataaag
gacagtgaaaaacaatgttctaaacaggaagatgacataaaggccttagagacagagctg
gttgatttagatggtgcatggagaagttttgaaaagcagattgaggaagaaattttactt
aaagggcgagacattgaactagaagccagtcagctggatcaatacaaagaacttaaggaa
caagtaagaaagaaagtggctataatgacccaacaattggaaaagctgcagtgggaacaa
aaggctgatgaagaaagactggcatatgaaaagaggaggcatggggaagctcaggaaaat
ctaaaacaaataaaaggacaaatagaagatcataaaaagcgaatagagaagttggaggag
tatataaaaacatgcatgaatttcttgaaagagaaaaaacagcaagaggaaaccctagtg
gatgaaattgaaaagacaaaatcaagaatgtctgaagtgaatgaagagctgaatcttatc
agaagtgaactgcagaatgctggaattgatagccatgagggaaaacgtcagcaaaagaga
gcagaggttctggaacaccttaaaagacttcacccagattctgtgtttggaagacttctt
gacctgtgtcatcctatacataagaaataccagctggctgttactaaactttttggtcgg
tacatggttgccattgttgtagcctctgaaaaggtagcaaaagattgtattcaatttctg
aaggaggaaagagctgaacctgagacattccttgctttagattaccttgatatcaaacca
atcaatgaaagattacgggagattaaaggctgtaaaatggtgattgatgtcataaagact
cagtttcctcagctgaagaaagtaattcagtttgtgtgtggaaatggccttgtctgtgag
actgtggaagaagcaaggcatattgccttcaatggacctgaaagacggaaaacagtagct
cttgatggaacgttatttttaaaatctggagtcatctctggagggtcaagtgacttaaaa
tacaaggctagatgctgggatgagaaagaattaaagaatttaagagacaggagaactcaa
ctaatccaagaattaaaggatttaatgaagacacttcgcaaggaagcagatttgaaacaa
gtacagactctagtacaaggaactcatacacgactcaaatattcgcaaagtgaactagaa
atgattaaaaagaagcaccttgctgctttttaccaggaacaatctcagctacaaagtgaa
ctgctaaatattgagtctcaatgtactatgttgagtgaaggaatcaaagaacgacaacga
agaattgaggaatttgaaggaaagatacataaggttgaagatgatatttttcaacacttc
tgtgaagaaattggtgtagaaaatattcgtgaatttgagaacagacatgttaaacagcaa
caagaaattgatcaaaaaagattagaatttgagaaacaaaatactcggcttaatgttcaa
cttgaatatagtcgcaatcagctgaagaaaaaactgaataagattaacacattaaaagaa
actatccagaaaggtagagaagacatcgataacctaaagaaggctgaagaaaattgtctg
aaaattgtggatgaactcatggagaaacggcagcagcttaaggacatagttgtcactcag
aacaccaacgctgagaaggtccaagctcagatggaagaggggcggaagaggtttctggca
gcagacagggaagtgggaaaacggcaaaaagaagttgtaatccttcaaacttctctggaa
cagaagcggttagagaaacataacatgttgcttgattgcaaagttcaagacattgaaata
attcttttgttggggtcactggatgacatcattgaagtggagttgggacctgaagcagaa
ggtacccaggcaacaatggatatgtatgaaaaagaagcagccattgagatagactacagc
tctctaagagaggatttgaaggctctacaatctgacaaggaagttgaggcccaccttaga
ctcctgcggcaacaaatagcatcccaggaggatgtcctgctgaggacagcggccccgaac
ctcagagccccggagaacctaaagactgtcagagacaagtttcaggagtacacagacgct
tttgaggccagcagaaaggaagccagaacatgtaggcaagagtttgaacaggtgaaaaaa
aggagatacaatcttttcagccaatgttttgagcacatctcagtcgcaattgatcagatc
tacaagaagctctgcagaaacaacagtgcccaagcatttcttagcccagaaaacccagaa
gagccttacttggagggaattagctataactgtgtggccccaggcaaacggttcatgcca
atggataatttgtcggggggagaaaagtgtgtggcagctttggctctcctgtttgctgtg
cacagttttcggcctgctccattctttgttttagatgaagtagatgcagccctggacaat
actaacattggcaaagtatcaagttatatcaaagagcagactcaggaacagtttcagatg
ataatcatttccctaaaagaggagttatattgcaaagctgatgcactgataggcatctat
ccagagcatgatgactgcatgttcagccgagttttgaccctagatctgtctcagtatcca
gatactgaagacagagaaagcagcaggaggtccgttaggatgcagaatgcccctgtgctg
taa
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