Lipotes vexillifer (Yangtze River dolphin): 103089331
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Entry
103089331 CDS
T03090
Symbol
TNN
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04151
PI3K-Akt signaling pathway
lve04510
Focal adhesion
lve04512
ECM-receptor interaction
lve04518
Integrin signaling
lve05165
Human papillomavirus infection
lve05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103089331 (TNN)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103089331 (TNN)
04518 Integrin signaling
103089331 (TNN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103089331 (TNN)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
103089331 (TNN)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103089331 (TNN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lve00536
]
103089331 (TNN)
Glycosaminoglycan binding proteins [BR:
lve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103089331 (TNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Fn3_Dep-1_3rd
EGF_TEN
EGF_Teneurin
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
DUF4998
EGF_2
Fn3_VIN3
Fn3_Dep-1_4th
DUF7949
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
103089331
NCBI-ProteinID:
XP_007451428
UniProt:
A0A340WPI6
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MGLQGMFCFPLGLLFGSVLLVASAPATLESSGCSEKEQQVTVSHTYKIDVPKSALVQVEA
DPQPLRDDGASLLAPGEVEEQNIIFRHKIHLQTPQKGCELAGSIQDLLVRVKKLEEEMAE
VKERCSAQRCCPGAAGLSHHCSGHGTFSPDTCSCHCEQGWEGADCERPACPGACSGHGRC
VDGRCLCEQPYVGADCAYPACAENCSGHGVCVRGVCQCHEDFTSKDCSERRCPGDCSGHG
FCDAGECYCEEGFTGLDCAQVVAPQGLQLLKSTEDSLLVSWEPSSQVDHYLLSYYPLGKE
LSIKQIQVPKEQHSYEILGLLPGTKYIVTLRNVKKEISSSPQHLLATTDLAVLGTAWVTD
ETENSLHVEWENPPTKVDYYKLQYGPLTGQEVAEVTVPKSSDPKSRYDITGLQPGTEYKI
TVVPMRGDLEGKPILLNGRTEIDSPTNLVTDRVTEDTAMVSWSPVRAVIDKYVVRYISTD
GETKDTAVYREQSSTVLTGLKPGEVYRVYVWAERGNQESKKADTKALTGIDSPQNLVTDG
VTENTATVSWDPVQAVIDRYLVRYTSAEGDSREVPVGKEKSSTVLTGLRPGVEYTVHVWA
QKGDQESREADTKALTGIDSPQNLVTDQVTENTATISWDPVQAVIDRYLVRYTSAGGDSG
EVPVGKEQSSAILTGLRPGVEYTVHVWAQKGDRESRKADTTAPTEIDSPQNLVTDRVTEN
TATISWDPVQAVIDRYLVRYTSADGDSGEVPVGKEQSNAVLTGLRPGVEHTVHVWAQKGD
RESRKADTKAPTAIDSPKNLVTNRVTENTATISWDPVQAVIDRYLVRYTSAEGDSGEVPV
GKEQSSAVLTGLRPGVEYTVHVWAQKGARESRKADTTAPTDIDSPKNLVTDQVTENTATV
SWDPVQAVIDRYLVRYTSADGDSGEVLVGKEQSSAVLTGLRPGVEYTVHVWARKGDRESR
KADTTAPTDIDPPQNLHPSAVTQSGGVLTWIPPSAQIDGYILTYQFPDGTVKEVQLGRGD
QRFELQGLEQGVTLPVSLVAFKGDRRSRSVSTTLSTVGARFPHPSDCSQVQQNSNIASGL
YTVYLHGDASRPLQVYCDMDTDGGGWIVFQRRNTGQLDFFKRWRTYVEGFGDPMREFWLG
LDKLHNLTTGTPTRYEVRVDLQTANESAYAIYDSFQVASSKERYRLTVGKYRGTAGDALT
YHNGWKFTTFDRDNDIALSNCALTHHGGWWYKNCHLANPNGRYGETKHSEGVNWEPWKGH
EFSIPFVELKIRPHGYSGEHVLGRKKQTMGENSRTF
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgggtctccaggggatgttctgcttccccctggggctcctgtttggctctgtgctcttg
gtggcctcagccccggccactctcgagtcttctggctgcagcgagaaggagcaacaggtc
actgtcagccacacctacaagattgatgtgcccaagtccgccctggtccaggtggaggct
gaccctcagcccctccgtgatgatggagcctcactcctggccccaggggaggttgaggaa
cagaacatcatcttcaggcacaagatccacctgcagacaccccagaagggctgcgagtta
gcaggcagcatccaggacctcctggttcgggtaaagaagctggaggaagagatggcggag
gtgaaggagcggtgtagtgcccagcgctgctgcccgggagctgctggtctgagccaccac
tgcagcggccacgggactttctccccggacacctgcagctgccactgcgagcagggctgg
gagggcgccgactgtgagcggcccgcctgccctggcgcatgcagcggccacgggcgctgc
gtagacggccgctgcctgtgcgagcagccctacgtgggggccgactgcgcctaccccgcc
tgcgcggagaactgcagcgggcacggcgtgtgcgtgcgcggcgtctgccagtgccacgag
gacttcacgtctaaggactgcagcgagcggcgctgcccgggcgactgcagcggtcacggc
ttctgcgacgcgggcgagtgctactgcgaggagggcttcaccggcctcgactgcgcccag
gtggtcgccccccagggtctgcagctgctcaaaagcacagaggattccctgctggtgagc
tgggagccctccagccaggtggaccactacctcctcagctactaccccctggggaaggag
ctctctatcaagcagatccaagtgcccaaggagcagcacagctatgagatccttggcttg
ctgcctggaaccaagtacatagtcaccctgcgcaacgtgaagaaagagatttccagcagc
ccacagcatctacttgccaccacagatcttgctgtgcttggcactgcctgggtgacggat
gagactgagaactccctccatgtggagtgggagaaccctccgaccaaggtggactactac
aagctgcagtatggccccctgacagggcaagaggtggccgaggtcaccgtgcccaagagc
agtgaccccaagagccgatatgacatcacgggtctgcagccggggacagaatataagatc
acagtcgtccccatgaggggagacctcgagggcaagccgattctcctgaatggcaggaca
gagattgatagtccaaccaatttggtcactgatcgagtgacagaagacacagcgatggtc
tcctggagcccagtccgggctgtcattgataagtatgtggtacgctacatctccactgat
ggggagacgaaggacacagctgtgtacagggagcagagcagcaccgtcctgacgggcctg
aagccgggagaggtgtacagagtctacgtgtgggctgagaggggcaaccaggagagcaag
aaggctgacaccaaggccctcacaggaattgacagcccccaaaacctggtgaccgacggg
gtgacagagaacacggccaccgtctcctgggacccagtgcaggccgtgattgacaggtac
ctggtgcgctacacctctgctgaaggagactccagggaggttccggtggggaaggagaag
agcagcaccgtcctgactggcctgaggccgggcgtggagtacacagtacacgtgtgggcc
cagaagggggaccaggagagcagggaggccgacaccaaggccctgacaggaatcgacagc
ccccaaaacctggtgactgaccaggtgacagagaacacggccaccatctcctgggacccg
gtgcaggccgtgattgacaggtacctggtgcgctacacctctgcgggcggagactctggg
gaggttccggtggggaaggagcagagcagcgccatcctgacgggcctgaggccgggcgtg
gagtacacggtgcacgtgtgggcccagaagggggaccgggagagcaggaaggccgacacc
acggccccgacagaaattgacagcccgcaaaacctggtgaccgaccgggtgacagagaac
acggccaccatctcttgggacccggtgcaggccgtcattgacaggtacctggtgcgctac
acctctgctgatggagactccggggaggttccggtggggaaggagcagagcaacgccgtc
ctgacgggcctgaggccgggcgtggagcacacggtgcacgtgtgggcccagaagggggac
cgggagagcaggaaggccgacaccaaggctccaacagccattgacagccccaaaaacctg
gtgaccaaccgtgtgacagagaacacggccaccatctcctgggacccggtgcaggccgtg
attgacaggtacctggtgcgctacacctctgctgaaggagactctggggaggttccggtg
gggaaggagcagagcagcgccgtcctgacgggcctgaggccgggcgtggagtacacggtg
cacgtgtgggcccagaagggggcccgggagagcaggaaggccgacaccacggccccgaca
gacatcgacagccccaaaaacctggtgaccgaccaggtgacagagaacacagccactgtc
tcctgggacccggtgcaggccgtgatcgacaggtacctggtgcgctacacctctgctgac
ggagactccggggaggtcctggtggggaaggagcagagcagcgccgtcctgacgggcctg
aggccgggcgtggagtacacggtgcacgtgtgggcccggaagggggaccgggagagcagg
aaggccgacaccacggccccgacagacattgaccctccccagaaccttcatccgtctgct
gtaacacagtctggtggggtattgacctggatacccccctctgctcagatcgatggctat
attctgacctaccaattcccagatggcactgtcaaggaggtgcagcttggaagaggggac
cagaggtttgagttgcaaggccttgagcagggtgtcaccctccctgtctccttggttgcc
tttaagggtgatcgccggagcaggagtgtatccaccaccctttccacagttggtgcccgt
tttccacacccttcggactgcagtcaagttcagcagaatagcaacatcgccagtggtctc
tacaccgtctacctgcacggggatgccagtcggcccctgcaggtgtactgtgacatggac
acggatggaggcggctggatcgtcttccagaggcggaacactgggcagctggatttcttc
aagcgctggcggacctacgtggaaggcttcggggaccccatgagggagttctggcttgga
ctcgacaagctacacaacctcaccacaggcacgcccacccgctatgaggtgagagtggac
ttacagactgccaacgaatctgcctatgccatatatgactccttccaagtagcctccagc
aaggagcggtacaggctgacagttgggaagtacagaggcacagcaggggacgctcttact
taccacaatggatggaagtttacaacctttgacagagacaatgatatcgccctcagcaac
tgtgccctgacgcatcatggcggctggtggtacaagaactgccacttggccaaccctaat
ggcagatacggggagaccaagcatagtgagggggtgaactgggagccatggaaaggacat
gaattctccattccttttgtggagttgaagatccgccctcatggctacagcggggagcat
gtcctgggcagaaagaagcaaacaatgggagaaaattcgagaacattctga
DBGET
integrated database retrieval system