Lytechinus variegatus (green sea urchin): 121407639
Help
Entry
121407639 CDS
T11173
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lvg04040
]
121407639
Ion channels [BR:
lvg04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
121407639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Cmyb_C
PHR
Motif
Other DBs
NCBI-GeneID:
121407639
NCBI-ProteinID:
XP_041454743
LinkDB
All DBs
Position
2:23960107..23987954
Genome browser
AA seq
1290 aa
AA seq
DB search
MPRGKVPDGLEMDNLQLRPGETSPRSPLTPTIKLSRPPSSSIDRKSSLSYTFVNANEEAD
LVNGGFIDNDKVSSEIQKHQQNGNGTSDASRGANSAPPLNGHSPVESWSLSGSPGSNHTN
GDVLNNHKNKNGAYSISRCLMPPKKNSKPKRHSLPLPGFVESSSLKSSDDEADLPKRTTL
KNGGSTRSMNLLPRNVPSPTKSNASPWKRWFKRKASNGSEQSSFSDASWMSSAEYDDGEK
KPKLWNLARSITKRVSKLRNNEVAPMSQNSLAPPEPAPATATDNNLKPTSVRRRLDSFAP
SSVGDVADEIHFKTSRFGLITSCWKRFKALRFPEYFDPLGGWWLCWLSVVTMAFLYNAIV
IFLRGAFRDKYQTSNNIGYWVTVDYLCDFVYIIDMLLFRSRLMFFQAGQGITDKRCMLTH
YTSSRLFKFDLLSLLPLDLFYFSIGRVESLLRLPRLFKFHSYLEFSQKFENKSKTAHAIR
IFRMVCYLLYMIHLNTCLYYAILFWEGIRTDEIAMREDYWVYLDPEVDVYTKCLFRSAKT
LIVIGNLPPPNTNSQIFFMNIDFIVGVFVFASMIGQMRDISAKAGATKEQFRRQMDDTMN
LLQVWNIPESVQKRVRSYYIYSWDQGAVLDERDLLLGVPIRMQTDIAINVHMDTLSRVSL
FQDCDKMLLRDLVLKLRPLVYLPNEYICRKGAVGKEMYIIVDGSVQVLGGENNSKVLATL
HPGSVFGEISLLSVGVGNRRTADVAAPGFANLFVLDKKDLQEVVVNYPDAQESLKRKARE
ILKQNQANDSKSKKRRGKSLIAESILTRDPETTPTFFNAVLQIARNKRITATILKGSFNM
KNEDDDDDSRFAFYSSSDISTDEEAPVTIKKRKRPRFTKKKGLIKDALKLGSPGGGGSSS
FDDRSDSDYPEPTSVVVHPIPKEQQNITSNPSLPNQIPDALPLSLPHLDHALPSPGLSSS
MVTDNDPLEDDQDAHDSGVDVPLDGSAGALTGGSFDYPGEPDGMALDPPGRPNNDNPEAA
AIRSEPKIEFSQDEQEKQEDNESTIGAGESDQITASKDRKRSTQSCQESRPTTPTPTKTA
PSEKPSGPLRRQSSPAAPTGGAPLQHQQQQPWMQGPRQIPKVLLERQATPAAEVEQAWSP
VHRSSEKKDEDFKVKIEQSSSEKEDDKEEEEEMEKGIGEDTGNGKQDEIIDIEEEEKKGG
GHQEDGASSHKDKGSSVDPTQDTKASGTHPKKVSKRSSSESSQKAFKPNIQYNPRSIYTT
SARTDRPKSKSGSKTGKSKKHSNGDKQKKE
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaggaaaggtacccgacggcttggagatggataatctccagctaagaccaggc
gagacaagccctcgatcccctctgaccccaacgatcaagctctcgcgacctccgagtagc
agcatagaccgcaagtccagtctctcttacactttcgtcaatgcaaatgaggaagccgat
ttagtgaatggtggatttatagataatgataaggtttcaagtgaaattcagaagcatcaa
cagaatggaaatggaacttctgatgcaagcagaggagctaacagtgccccgcccttaaac
ggtcactcccccgttgagtcttggagtttgtccgggtcaccaggcagcaaccacaccaat
ggggacgttctcaacaaccacaaaaacaagaatggagcatactccatatcaagatgtctg
atgcctccgaagaagaattctaaacccaagcgacacagcctgcctttgcctggatttgta
gaaagcagtagcctcaagtcatcagatgatgaggcagacttgccaaagcggaccaccctc
aagaatggaggcagcacccgcagcatgaatctgctcccccgcaatgttccgtctccaacc
aagagcaatgcatcgccatggaaacgatggttcaagaggaaggcttctaatggcagcgag
cagagcagtttcagcgatgcaagctggatgagcagtgctgaatacgatgatggagaaaag
aaacccaaactgtggaatcttgcaaggagcatcactaaacgagtgagcaaactccggaac
aatgaggttgcaccaatgtcgcagaacagcttagcccctcctgaacctgctcctgccaca
gccacagacaacaatctcaaacccaccagtgtccgtcgacgtcttgattcctttgccccg
agcagtgtcggggacgttgctgatgagatccatttcaagaccagcaggtttggacttatc
accagctgctggaagagattcaaggccctgcggttcccggaatactttgaccctcttggt
ggctggtggttgtgttggctgagcgtagttaccatggcattcctctacaatgccatcgtc
atcttcctacgcggtgcatttcgggataaataccagacaagcaataacatagggtactgg
gtgaccgtagactacctgtgcgacttcgtctacatcatagacatgctgctcttcaggtcc
cggcttatgttctttcaggccggccaaggcattactgacaaacgatgcatgttgacacac
tatacatcttcaagacttttcaagtttgatttactatccctgctgcccctggacctgttt
tacttctccatcggtcgtgtggaatcactcctcaggctgccacgtcttttcaagtttcac
tcctatctcgagttctcacagaagtttgaaaacaagtcaaaaacagcccatgccatcagg
atattccgtatggtctgttacctactctacatgattcatcttaatacctgtctctactac
gctatcctgttttgggaagggatacgaacagatgagatagccatgagggaggattactgg
gtctatctggaccccgaagtagatgtgtatacaaaatgtttattccggtcagcaaagaca
ctgattgtgattggcaatctgcccccacccaacaccaacagtcagatcttcttcatgaac
attgacttcatagttggcgtgtttgtcttcgcttctatgattggtcagatgagagacatt
tcagccaaagctggagccaccaaggaacagttccgtcgtcaaatggatgacacaatgaac
cttctacaggtgtggaatatccctgaatccgttcagaagagagtccgcagctactacatc
tactcttgggatcaaggcgctgtccttgatgagagagacctgttactcggagttcctatc
cgtatgcagactgatatagccataaatgttcacatggataccctcagtcgagtttcactc
ttccaggactgtgataagatgcttctgcgtgatcttgttctcaaacttcgaccattggtt
taccttcctaatgaatatatctgccgaaagggagcagtagggaaagagatgtacatcata
gttgatggtagtgtgcaagttcttggaggagagaataactccaaggtgcttgctactctt
catccaggaagtgtctttggagaaatcagcctccttagtgttggtgttggtaatcgtcgc
acagcagatgttgctgccccaggctttgccaatctctttgtgttggacaagaaggaccta
caggaagtggtagtcaactatccagatgcccaagaaagtttgaaacgaaaagctagggag
atcctgaaacagaaccaagcaaatgattcaaagagcaaaaagaggcgaggaaaatctctg
attgctgagtctattcttactagggatccagaaacaacaccaacattcttcaatgccgta
ctgcaaatcgctcgcaacaagcgcatcaccgccaccatcctcaaaggatctttcaatatg
aagaatgaagacgatgacgatgactcaagatttgcattctactcgtccagtgatatctct
acagatgaggaagctccagttactataaagaagagaaaacgaccaaggttcaccaagaaa
aaaggcttaatcaaagatgctcttaagctaggcagtcctggaggcggaggtagctcctcc
tttgatgacagatccgacagtgactaccctgagccgacatcagtcgtggttcatcccatt
cccaaggagcagcagaacatcaccagtaaccctagtctccccaaccagattcctgatgcc
ttacccctctccctcccgcacctcgaccacgcccttccctcccctggtctttcctcctcc
atggtaacagacaatgaccccctggaggatgatcaggatgcccatgatagtggggtggat
gtacccctggatggcagcgcaggagcgctgacagggggcagctttgactatcctggggaa
cccgatggcatggctctggatcctccaggacgacccaataatgataacccggaggctgca
gccatcaggagtgagccaaagatagaattctcccaggatgagcaggagaaacaagaggat
aacgaaagcaccataggagcgggtgaaagtgaccaaattactgcaagcaaagacaggaaa
agatcaacccaatcttgtcaggaaagtagaccgactacacctaccccaaccaagactgca
ccatcagagaaaccctctggacctctgaggcgccagtcatcaccagcagcaccgacggga
ggtgcaccacttcagcaccagcagcagcagccatggatgcagggcccaaggcagataccg
aaagtgttgcttgagcgccaggcaacaccggcagcggaagtggagcaggcgtggtcaccg
gtacaccgtagcagtgagaagaaggatgaagattttaaagtgaagatagagcagtcaagc
agtgagaaagaagatgataaggaggaggaggaggaaatggaaaaaggaatcggtgaagat
acaggaaacggcaaacaagatgaaatcattgacatcgaagaggaggaaaagaagggtgga
ggacatcaagaagatggagcatcttcccacaaggataagggttcatcggttgatcctaca
caagataccaaagccagcggcacacatcccaaaaaggtatctaagagatcatccagcgag
tccagtcaaaaggccttcaaacccaatatccagtataatcctcgatcaatctatactaca
tcagcacgcaccgacagacccaagtccaaatcaggaagcaagaccggcaagagcaaaaaa
cacagcaatggggataagcagaaaaaggagtaa
DBGET
integrated database retrieval system
