Lytechinus variegatus (green sea urchin): 121409287
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Entry
121409287 CDS
T11173
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121409287
Membrane trafficking [BR:
lvg04131
]
Protein recycling
Others
EARP complex
121409287
Endosome - Golgi transport
Tethering complex
GARP complex
121409287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
Laminin_II
COG5_N
COG4_N
Snf7
GrpE
FBF1
Syndetin_C
XhlA
HAUS1
Sec8_N
Bestrophin-like
COG3_N
VPS51_Exo84_N
ODAD1_CC
ING
DUF8104
NBD94
Med11
Cauli_AT
DUF7018
Seryl_tRNA_N
DUF2205
TMEM120A-B
CREPT
ATG16
Motif
Other DBs
NCBI-GeneID:
121409287
NCBI-ProteinID:
XP_041457131
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All DBs
Position
2:complement(83090317..83104878)
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AA seq
831 aa
AA seq
DB search
MATIEEDETEIFEDDHLNSLLNFPPDVQQAIEQVLPSSDPLDRPDFNAVDYINNLFPTEQ
SLANIDEVVNRMRLKIRRLDDEIRAVVRGQTTAGQDGREALKEAQKAIQELFKRIKDIKE
KADKSEQMVKEITRDIKQLDHAKRHLTSSITTLNHLHMLVGGVDSLESMTRRRQYGEVAN
LLQGVVNVMEHFQKYMSIPQIRQLADKVRKIQSELGVQILADFEESFANQGSRPIGNMRE
LAEACLVVRVLDPKVKKDLMKWFVTLQLQEYMVLFQESQDVAWLDKIDRRYAWLKRALVE
FEEKYGPMFPRDWEVSERICVEFCNVTRTELGKIMQKRESEIDVKLLLFAIQRTTNFETI
IAKRFSGITLQPAGESSENMMTEEKPVSTNPFEMDDEPVEVKTLLKPKLSSFQGIISQCF
EPHLHIYIQSQDRNLSDLINRFVEDFKTQGPPRIESEESGAVLPSCADLFVYYKKCMVQC
SQLSTGTPLLDLTQTFQKYLRVFANRLLTNNLPKSQTTTPAGGLNISALLKEGLKESSSS
DVPKFTPEEQYLVCSILCTAEYCLDTTQQLEEKLKEKINPSMSDRIDLNGEMDVFHNVIS
NCIQLLVQDLETACDPALTAMNKVNWSSVETVGDQSGYVTAITTHIKQALPVIRDNLASA
RKYFTQFCIKFANSFIPRFISHIYKCKPISTVGAEQLLLDTHSLKTVLLDLPSIGSQVTR
KAPASYTKIVVKGMTKAEMILKVVMSPQDPAEAFVDNYIKLIADTDTSNFQKLLEMKGLK
RSDQNAMLDIFKARLSSTSHPGENVVVVTSSQEQQDLSRIRRLEKIIKRKL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggctaccatagaagaggatgagactgaaatatttgaagatgatcatttaaattctctt
ttgaatttccctccagatgtacaacaagcaattgaacaggtcctcccatcttcagaccca
ttggataggcctgatttcaatgctgtggattacataaataatctcttccctacagaacaa
tcacttgccaacatagatgaggtagtaaatcgtatgaggctcaagatacgccggcttgat
gatgagatcagagcagttgtcagaggacaaacaactgcaggccaggatggaagagaagct
ctcaaggaagcacagaaagctattcaagaactcttcaaaaggataaaagatatcaaagaa
aaggctgacaaatcagaacagatggtgaaagaaataaccagagacatcaagcagcttgat
catgccaaacgtcacctgacttcatctattacaacccttaatcatcttcatatgcttgtc
ggaggtgtggattcgctggagagcatgacaagaagacgtcagtatggtgaagtagcaaat
cttcttcaaggagttgtcaatgtgatggaacatttccaaaaatacatgagtatacctcag
atcaggcaactagctgacaaagttcgcaaaattcagtctgaattaggtgttcaaattcta
gcagattttgaagaatcctttgccaaccaaggaagtaggccgataggaaatatgagagaa
cttgcagaggcttgtttagtagtcagggttcttgatcccaaagtcaagaaggacttgatg
aaatggtttgtgacactccaacttcaggagtacatggtgctcttccaggagagccaggat
gtagcctggttggataagattgatcgtcgttatgcttggctcaagagggcgctagttgaa
tttgaagagaagtacggtcctatgttccctcgtgattgggaggtcagtgagaggatatgt
gtagaattctgcaatgtcactaggactgaacttggtaaaataatgcagaagcgagaatct
gagatagatgtcaagttattactctttgccatccaacgtacgactaactttgaaaccatc
attgctaaacggttcagtggtatcaccttacaacctgcgggtgaatcatcagaaaatatg
atgacagaagaaaaaccagtgtcaacaaatccatttgagatggatgatgaaccagttgaa
gtaaagacattactcaaacccaagctatcgtcattccaaggcatcatcagtcaatgtttt
gaaccacatctgcatatctacatccaatcacaagacaggaatctatctgacttgatcaac
cgatttgtagaggacttcaagacgcagggtcctcctcgtattgaatctgaagagagcggt
gctgtgctgccctcgtgtgctgatctgtttgtatactataagaaatgtatggtacaatgc
tctcagcttagtacgggtacaccactattggacttaactcaaactttccagaagtatctg
agagttttcgccaacagacttctcacaaacaatctaccaaagtcacaaactacaactcca
gctggtggtctaaacatctcggcccttctcaaagaaggtttgaaagaatcttcatcttct
gatgtaccaaagtttacacctgaagaacagtacttggtttgtagtatattatgcacagca
gaatactgtctggatactacccaacagcttgaagagaaattaaaggaaaaaatcaaccca
tcaatgtctgacaggatagacctcaatggagaaatggacgtctttcacaatgttatatca
aactgtattcagttgttagtgcaagatctagagactgcatgtgatcctgctctaacagcc
atgaataaggtgaactggtcatcggtcgagacagtaggtgatcagagtggttatgtaacg
gctattacaacacatatcaaacaagcattaccagtcatacgggataacctagcatcagct
agaaaatacttcactcaattctgcatcaaatttgccaattctttcattccacgattcatc
agtcatatctataaatgtaaacctatcagtacagttggtgctgaacagcttcttcttgac
acacattccctaaagacagtgctcttagatctaccttccattggatcacaagtcactagg
aaagcacctgcaagctataccaagatagtagtgaaaggtatgaccaaagcagagatgatc
ctgaaggttgtaatgtcacctcaagaccctgctgaagctttcgttgataactacatcaaa
ctcattgctgatacagacacctcaaactttcagaaacttctagaaatgaagggtctgaag
agaagtgaccagaatgccatgttagatatcttcaaggcacgtttatcatcaactagtcat
cctggggagaatgtagtggttgtgacatcatcacaagaacaacaagatcttagtaggata
cgaagactggagaaaatcattaaaagaaagctgtag
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