Lytechinus variegatus (green sea urchin): 121410041
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Entry
121410041 CDS
T11173
Name
(RefSeq) probable cysteine--tRNA ligase, mitochondrial
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121410041
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lvg01007
]
121410041
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lvg03016
]
121410041
Enzymes [BR:
lvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
121410041
Amino acid related enzymes [BR:
lvg01007
]
Aminoacyl-tRNA synthetase
Class I (G)
121410041
Transfer RNA biogenesis [BR:
lvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121410041
Prokaryotic type
121410041
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
DALR_2
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
121410041
NCBI-ProteinID:
XP_041457806
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All DBs
Position
1:25173748..25187679
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AA seq
605 aa
AA seq
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MGLRIASDLFGRHGIICSLGLTSGYRSRKTLYLRRDVCSPSSASCHSHFSQARYPVQRDG
ENTVCVLNSLSAAQDRKSAKKEPLLLMNKNVATWYACGPTVYDSAHIGHASSYVRFDIIR
RILAEFFQTSVVMVMGITDIDDKIIKRSQEQKIEDFRELARFYEREFYQDMQYLNVLPAT
VYTRVSDHIPDIIAFIGKIIRNGFGYTTSNGSVYFNVDAFTLERYNKLASQDLDVQHDDG
KEMIDPEKRHPRDFALWKGVKPGEPWWEAPWGKGRPGWHIECSAMSHAIFGERLDIHTGG
RDLAFPHHNNEIAQCEACFNSGQWANYFLHSGHLYRKHDIDKMSKSLQNVVSIQEFLKTY
TSNQFRFLCLMSKYDHDLEYGPGTMQQAVVLHRQMSAFLNDADAYVKGQICCRPFNEAEL
MQRLENTQDEVIGALADDFDTKRALDCIMKLAHTCNSNFSQVSEEASSRSPGAVAAVATY
INQVLSNLGLQMSTRSGTHSDQSSQAMNTALDTLVNFRQDVRRWALTDQEDHGISSVIQS
SNGDSEEMRLRRKKLMKERAPLLNTCDHVRDTLAQNGIQIKDRGASATWEFVEKTKVKTE
DGTDR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgagaattgcaagtgacttattcggccgacatggcataatttgcagtttaggt
ctaacttctggatatcggagccggaagactttgtatttgagaagagatgtctgctcccca
tcatctgcttcctgccattcccatttctctcaagccaggtatcccgtgcagagagatgga
gagaacactgtctgtgtcttgaactcattatcagcagcacaagatcggaaaagtgcaaag
aaagagcctctgctactgatgaacaaaaatgttgcaacatggtatgcttgtggtcctaca
gtttatgattctgcccatattgggcatgcaagctcttatgtcagatttgatatcatccgt
cgcatcttagcagaattcttccagacgagcgttgtcatggtgatgggtatcactgacatc
gatgataagatcataaaacgttcacaggagcagaagatagaggacttcagagaattagct
agattttatgagagggaattctatcaagatatgcaatatcttaatgtcttaccagcgact
gtctataccagagtatcagatcatataccagacataattgctttcatcggtaaaatcatc
agaaatggctttggatatacaacaagtaatggtagtgtgtacttcaatgtggatgcgttc
acactagaaagatacaacaagcttgccagtcaagacttggatgttcagcatgatgatggt
aaagagatgattgatcctgagaagagacacccaagggactttgctctatggaaaggagtc
aagccaggagaaccatggtgggaagcaccatggggaaagggaagaccaggatggcatatt
gaatgttctgctatgtcacatgccatctttggtgagcggctcgatattcatactggtggg
cgagatctagctttccctcatcacaacaatgagatagctcaatgtgaggcttgctttaac
tctggtcagtgggctaactacttcctacattcaggtcatttatacaggaaacatgatatt
gataagatgtccaagtcccttcagaatgttgtgagcatccaagagttcttgaagacatat
acctcaaaccagttcagattcctgtgtctaatgtccaagtatgatcatgatttagagtat
ggacccggaacaatgcagcaagcagtagtacttcatagacaaatgtcagctttcctcaat
gatgccgatgcgtatgtcaaaggtcaaatatgctgtcgaccattcaatgaagctgaactc
atgcaaaggttggagaatactcaagatgaagtgataggagcattagctgatgattttgat
acaaagagggcactagactgtattatgaaactggcccatacatgcaactcaaatttcagt
caagtatcggaggaggcgtcaagtcgcagcccaggggcagttgcagctgtagctacatat
atcaaccaagtcttatctaacttaggattacaaatgtctacaagatcaggtacccattct
gatcagtcatcccaagcaatgaacactgctctagacactctggtcaactttagacaggat
gtccgtcgatgggccctcactgaccaagaggatcatgggatatcgagtgtaattcagagc
agcaatggggattctgaggaaatgaggctgagaagaaagaaactgatgaaagagagggct
ccactcctcaacacatgtgatcatgttagagatacgctagcacagaatggtatacagatt
aaggatcggggagcatcagccacatgggaatttgtagagaaaacaaaagtgaaaacagag
gatggaacagacaggtga
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