Lytechinus variegatus (green sea urchin): 121410492
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Entry
121410492 CDS
T11173
Name
(RefSeq) ribitol-5-phosphate xylosyltransferase 1-like isoform X1
KO
K21052
alpha-dystroglycan beta1,4-xylosyltransferase [EC:
2.4.2.61
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00515
Mannose type O-glycan biosynthesis
lvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
121410492
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lvg01003
]
121410492
Enzymes [BR:
lvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.61 alpha-dystroglycan beta1,4-xylosyltransferase
121410492
Glycosyltransferases [BR:
lvg01003
]
Glycan extension
O-Glycan
121410492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RXYLT1_C
RXYLT1_N
Exostosin_GT47
Motif
Other DBs
NCBI-GeneID:
121410492
NCBI-ProteinID:
XP_041458558
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All DBs
Position
3:21510936..21523922
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AA seq
412 aa
AA seq
DB search
MNTMIKRILQITLIFYLIVTAYTLYVLLLAPDEKKNVHQDQGVLGNAEIKKPKPKPVIPD
HQDVFAKVPIQAKNSTYSIEIWSKVGLGSYTWEHILNGKLESRLDGIWFYGELQMHNLKF
RMRDGDGVQPDKVPQDIENVMLILNGRAPDKEEYTRYWLDYLGSYSQLRRVVLMLIGNEQ
CQNDWVLPYMKSRGGPVDRLFIVYDTLIVNGDDIMQWPLGVATYRGFPKIEINQLNLRSP
RKHRCNFLGTMYPNSSREVLLKVINENNLQDYCYFKTRQQWEPDESEASLQAYINVILQS
DLTLSPVGMNVECYRIYEACALGSVPVVEDITTKGDCSPNPLRLLKKLGAPFIFIKDWKE
LPRIMEAEMKMSVDEIVDRRRRLVAWYETFKYKMKDILLGKIGEVFKEDALR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgatgataaaacgtattttgcagatcacccttatcttttatctgattgtgact
gcctacaccttgtatgtactcttgttagctccagatgagaagaagaatgtccatcaagac
cagggggttctaggtaacgctgagatcaagaagcccaaaccaaagcctgtgataccagat
caccaagatgtatttgccaaagtacccattcaagccaagaatagtacctattcaattgaa
atctggagcaaagtaggcctaggctcatatacttgggagcatatattaaatggaaagctt
gaatcaagacttgatggtatttggttctatggtgaacttcaaatgcacaacttgaagttc
agaatgcgtgacggagatggggttcaaccagataaagtccctcaggacatagagaatgtt
atgcttattttaaatgggagagctccagacaaagaggaatacacacgatactggcttgac
tatcttggatcatattcacaacttagacgggtagttttgatgctgattggtaatgagcaa
tgccagaatgattgggtacttccttacatgaagagcaggggtggacctgttgatagactc
ttcatcgtttacgatactctcattgtcaatggtgatgatattatgcagtggccccttggt
gtagcaacgtacagaggttttccaaagatagaaatcaatcagcttaatctacgttctcca
agaaaacatagatgtaatttccttggtaccatgtaccctaactcatcaagggaagtacta
ttaaaagtcatcaatgaaaataatctccaggattactgctactttaagacaagacaacaa
tgggagcctgatgaatcagaagctagtctccaagcatacattaatgtaatccttcagagt
gatctcaccctaagtcctgttggaatgaatgttgagtgctaccgtatctatgaagcatgt
gctctaggatccgtccctgtcgtagaggatataaccaccaagggagattgcagccctaat
ccattaagactcttgaaaaaactgggagcaccttttattttcatcaaggactggaaggag
ttgccaaggatcatggaggcagagatgaagatgtcagttgatgagattgtcgataggaga
agaagacttgttgcttggtatgaaacgtttaaatacaagatgaaagatatcttgctcggg
aaaataggagaggtatttaaagaagatgcgttgaggtga
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