KEGG   Lytechinus variegatus (green sea urchin): 121414308
Entry
121414308         CDS       T11173                                 
Name
(RefSeq) splicing factor 3A subunit 3-like
  KO
K12827  splicing factor 3A subunit 3
Organism
lvg  Lytechinus variegatus (green sea urchin)
Pathway
lvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121414308
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lvg03041]
    121414308
Spliceosome [BR:lvg03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    121414308
 Complex B
    121414308
 Complex C
   U2 SnRNP specific factors
    121414308
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd PBP1_TM TSX
Other DBs
NCBI-GeneID: 121414308
NCBI-ProteinID: XP_041463374
LinkDB
Position
4:complement(52599650..52631411)
AA seq 503 aa
METILEQQRRIHEEKERVVDALVKETLHKKTNNREQINSDFRAKQLLDRFVEGANTLREL
YEDRDGLRKEEIQALSGPNEFAEFYTRLKVIKDFHRKHPNEVSVPMSIEFDQLREERENP
AEENQSLVPFKDEEGYGKYMDLHECYDKYINLKGTEKVDYVTYLSIADRLFEISKDKKNA
EYRRYLDLILSYLQDYASRVKPILDFAEELDKVKKEFDIQWEAGTFPGWPKEAASAMTHA
GAHLDLSAFSSPEELASLGLDRLKSALMALGLKCGGTLEQRAQRLFTTKGVQLNELDQAL
FAKSKPGKGTKAGKKDAEKQKDTAFLEAQAYYFFELLGEQRQATRENVQRKQARTGTERE
DEDEEHFSDSDSDDEEEVIYNPKNLPLGWDGKPIPYWLYKLHGLNISYSCEICGNQTYRG
PKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTHIEDALALWEKLKNNKASERWLPEAEEE
FEDTIGNVVNKKTFEDLKRQGLL
NT seq 1512 nt   +upstreamnt  +downstreamnt
atggaaaccattttagaacaacagagaaggatacatgaggaaaaggagagagtagttgat
gcattggtgaaagaaactcttcataaaaagacaaataaccgtgagcagataaattcagac
tttcgagcaaagcaactacttgatcgctttgtagagggggctaacacactaagggagcta
tatgaagacagagatgggttacgtaaggaggagatccaagcattatcaggtcctaatgag
tttgctgagttctatacaaggttaaaggtcatcaaagatttccataggaaacatcctaat
gaggtttctgtgcctatgtcgattgagtttgaccaactgagagaagagagagagaaccca
gcagaggagaatcaatcattggttccattcaaagatgaggaaggatatgggaagtacatg
gatcttcatgaatgttacgacaagtatatcaatctcaagggcacagagaaagtagactat
gtgacctacctttccattgctgatcggctctttgaaatatcaaaggataagaagaatgca
gaatatagaaggtacctggacctaatactaagttatctgcaggactatgcgtcaagggtc
aagccaatcctggactttgcagaggaactagataaggtcaagaaagagtttgatattcaa
tgggaagcagggactttccctggctggccgaaagaagcagcgagtgctatgacccatgct
ggtgctcatcttgacctgtctgccttctcatcaccagaggagttggcctcgcttggtctt
gatcgtctaaagtcagccctgatggcactaggactgaaatgtggtgggaccctggaacaa
cgagcccagcgtctcttcactaccaagggggtccagcttaatgaactagaccaggccttg
tttgctaagagtaaaccaggaaaaggaactaaagctggcaagaaggatgccgagaaacag
aaagatacagctttcttagaagcacaagcgtattacttctttgaacttcttggggagcaa
cggcaagcaacgagagagaatgttcagaggaaacaagcacggactggaacagaacgagag
gatgaagatgaagaacacttctcagatagtgatagtgatgatgaagaagaagtcatctat
aatccaaagaaccttccactcggatgggatggaaagcctattccatattggttatacaaa
ctccatgggttgaatatatcatacagctgtgagatttgtggaaaccaaacatacagagga
cccaaggcatttcagagacactttgcagaatggcgtcatgcccatggtatgagatgtctt
ggtattccaaacacagctcactttgccaatgtcactcacattgaagatgcccttgcatta
tgggaaaaactgaagaataacaaggcgtcagagaggtggcttcccgaagcagaggaggag
tttgaagacaccataggaaatgttgtgaacaagaaaacctttgaagatcttaagagacag
ggtttactttga

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