Lytechinus variegatus (green sea urchin): 121414385
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Entry
121414385 CDS
T11173
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A-like
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lvg03036
]
121414385
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121414385
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
ERCC3_RAD25_C
HHH_3
UBA_8
HTH_70
HTH_8
HHH
CUE
Motif
Other DBs
NCBI-GeneID:
121414385
NCBI-ProteinID:
XP_041463476
LinkDB
All DBs
Position
4:57899271..57932400
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AA seq
1195 aa
AA seq
DB search
MYIMASGRVSSLLNRFKFEQRSSKKLTASSSGPEKTSSSVKHCGMNGDATQSSASSLQSR
SSTPDSDAILCIPETPTSDLPESIESGSPVFPSAKKRLAENSQRSLVTPAISSLLSPSTS
VAKSPTFGKQSHAANGKQSSPSSSHRTKNKQLRFVDESESESDNEPISHRRESSSHSPNS
HRDMKTNAGCETESDSTHIDTQSSLETVLYSYEEQGSLRPGGLKRKLSEMSSGGEVGDGD
EDEKDDKMKKDIMEQLKVCFPHKEQKELKRALKATDWNINQAANDLMQVGSPPRCKRCTS
PTIEPKKPSLIKKSNFQDAFSGWLQKPSTGQRKKNWPQQKKVPRKVISSSDDDTDDDVEV
LQKSKESNQKKTFKRIRTFSSDSMEDASPVKKTEGKSLDTGKNRDNQSDQESVSSSKKGE
GDQEILTDSDENEDDDKKSKGNGRAGNTSGKIANGFYKKGAPTQNGVAGKKPFRKVWAGF
LSRDSSSAAKSSGKKQRTKTASKATSIKPIKRPRSPRYSDEEEDDLRYGDSGSEYELEEE
VSPEFQAMAVTFFNDATLEELISVDGCSKGKAEKIISIRPFEDFSDLLEKFDGVKQLNAN
LVWNSEAVFQERKVVEDVMARCIKISERIQRKVTSVIENPDSAVNGQLTRQPALLNRSMQ
LKPYQLVGLNWLKLMHSEQVNGILADEMGLGKTIQVIALLSHLLEEGTKGPHLIVAPSST
VDNWVRELQTWCPALEVVLYHGSQEDRQEIREDLLYEDLPCNVIVTSYNICASSAEDRAV
FKKLPLHYAIFDEGHMLKNMKSQRYNHLMKIRAEKRLLLTGTPLQNNLQELISVLAFTLP
KMFSGKANDLTRVFSMKKQKTGNPHEQSSYEMERIAHAKQIMQPFVLRRIKADVLSQLPK
KKESIEHVEMTADQREGYTKLVASISKDLKVCGFKRGKMSSAMMELRKQANHPLLLRRHY
DNEKIRKMAKLMLEEPTHYDANEEYIYEDMEVMSDYELHRLCHEYGVLREYRLDQELVLQ
SGKFQLLDKMLAELKEQGSRVLLFSQFVMVLDIVEEYLNIRGHRFVRMDGQTPVQDRAEL
MDKFNEDESVFIFMLSTKAGGVGINLTAANTVILHDIDFNPYNDKQAEDRCHRVGQRREV
SVIRLVSKQSIEEGMLSCANYKLKLEKQMTRGFSGEDGKEDEKDIASLLRDALDI
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcatggcttcaggtcgtgtttcttctttactgaatcgttttaaattcgaacag
cggtcaagcaaaaagttaaccgcttcaagttctggaccagaaaaaacatcttcctccgta
aaacactgtggaatgaatggggatgcaacacagtcttcggcttcttcgctgcaatcccgc
tcatcaacgccagattctgatgctatcttgtgtatacccgagacaccgacatcagattta
ccagagtccatagaatccgggagtccagtgttcccatctgccaagaagcgacttgcagag
aacagtcagcggtccctggtcactcctgccatctctagcctcctctcaccttcaacaagt
gttgccaagagccctacctttggcaagcaaagccacgcagcaaacgggaagcagtccagt
ccgtcatcctcccacagaacaaaaaacaaacagctccgttttgttgatgaatcggagagc
gaatcggacaacgagcccatctcgcatcggagagaatcaagttctcattctccaaacagt
catcgggacatgaaaactaacgcaggatgcgagacagagtcggactctacccatatagac
acgcagagcagcttggagactgtgttgtacagttacgaagagcagggttccctgcggccg
ggcggtttgaagcggaagctgtcggagatgtcaagcggtggagaggtcggggatggtgat
gaggatgagaaggatgataagatgaagaaagacatcatggaacagctcaaggtctgcttt
ccacataaggaacaaaaggagctgaaaagggctttaaaagccacagattggaacatcaat
caggcagccaatgacctcatgcaagtgggaagtcctccaaggtgcaagcgttgcacctca
ccaacgatagagccgaaaaaaccttctcttatcaagaaatcaaatttccaggatgcattc
agtggctggctgcagaaaccttctacaggtcagcgcaagaagaactggccacaacagaag
aaggttcccaggaaggtcatcagctcctcagatgatgacaccgacgatgacgtggaagtc
ctgcagaagagcaaggaaagtaaccagaagaagactttcaagcggatacgaactttctct
tccgacagcatggaggatgcgtctcctgtcaagaagacggaggggaagtctttggacact
gggaagaacagggacaaccagagtgatcaagaatcagtatcttcgtccaagaagggtgag
ggggatcaggaaatccttacagactctgatgagaacgaggatgatgacaagaagagcaaa
ggcaatggccgagctggaaatacctcagggaagatcgcaaatgggttctacaaaaagggg
gcaccgacgcaaaatggtgttgcaggaaagaagccattccggaaggtgtgggccgggttt
ctttccagagatagcagttctgcagctaagtcatctggcaagaaacaaaggaccaaaact
gcttcgaaggcaacaagcatcaaacctatcaaacgaccacggtcaccgcgatacagcgat
gaggaggaggatgacctccgctacggtgacagcgggtcagagtacgaactcgaggaggag
gtcagtccagagttccaggccatggcggtcactttcttcaacgacgcaacccttgaggag
ctgatcagcgtcgacggatgctccaaagggaaagcggagaagataatttctatcaggcca
tttgaagacttctctgatctgttggaaaagtttgacggggtgaagcaactgaatgctaat
cttgtctggaattcagaggccgtgttccaggaacgcaaggtggttgaggatgtcatggct
aggtgcatcaagatctcagagcgcatacaaaggaaggtgacatcggttatcgagaacccc
gattctgctgtcaacggccagcttacgcggcaaccagccctacttaataggagtatgcag
ctgaagccctatcagttggtaggcttaaattggttgaagttgatgcactcggaacaagtt
aatggcatcttggcagatgagatgggtcttggaaagaccatccaggtcattgccctactc
agtcatctcctggaagaagggaccaagggaccgcatctcatcgttgccccatcttctacg
gtagacaactgggtgcgagagctccagacatggtgtccggccctcgaggtcgtactgtat
catggatcgcaagaggatcggcaggaaattcgggaggaccttctctatgaagaccttccc
tgcaacgttattgtgacctcatacaatatatgtgcgagtagtgctgaggatcgagcagtc
ttcaagaaactacctctgcattacgcaatctttgatgaagggcatatgctgaagaacatg
aaatcacagaggtacaaccatctcatgaaaattagggctgaaaagaggctactactgacc
ggaacccctctacaaaacaatcttcaagagctcatctcggtattggcattcaccctgcca
aagatgtttagtggcaaggcaaacgatctcacgagagtttttagtatgaagaaacaaaag
acgggcaaccctcacgagcagagtagctacgagatggagaggatcgcccacgccaagcag
atcatgcagccgtttgttctacgaaggatcaaggctgatgtactgagccagctaccgaag
aagaaggagagcatcgagcatgttgagatgacagcggaccagagggaaggttacaccaaa
cttgttgcctccatttccaaagacctcaaagtttgtggattcaaacgaggcaagatgtcg
tctgccatgatggaattacggaagcaagcgaaccatcccctgcttctgaggcgtcactat
gacaacgagaagatcaggaaaatggccaagctcatgctggaggagccaacccattatgat
gccaatgaagaatacatctatgaagacatggaggtgatgagtgattacgagcttcataga
ctgtgccatgagtatggggtcctgcgtgagtacagactagaccaggagctggtcctgcag
tctgggaagttccagctcctagataagatgctcgctgagcttaaagaacagggaagtcga
gttctattgttcagccaatttgtgatggttctagatatagtagaagagtatctgaacatc
agagggcatcggtttgtacgtatggacggacagacaccagtccaagacagagcggagctg
atggacaagtttaacgaggacgagtccgtcttcatcttcatgctgtcaacgaaagccggt
ggcgtcgggatcaacttgactgcagctaacacagtcattcttcacgacatagacttcaat
ccctacaatgacaaacaggccgaagatcgttgtcatagagtcggacaaaggagagaggta
agcgtgatacgcttggtgagcaagcagtctatagaagaaggaatgctatcctgtgctaat
tataaactcaagcttgagaaacagatgaccagaggattctcaggtgaagatgggaaggaa
gacgagaaggacatcgctagcttgctcagagacgctctggatatatga
DBGET
integrated database retrieval system
