Lytechinus variegatus (green sea urchin): 121414533
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Entry
121414533 CDS
T11173
Name
(RefSeq) tubulin alpha-1B chain-like
KO
K07374
tubulin alpha
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04145
Phagosome
lvg04517
IgSF CAM signaling
lvg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121414533
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121414533
09142 Cell motility
04814 Motor proteins
121414533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121414533
03036 Chromosome and associated proteins [BR:
lvg03036
]
121414533
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lvg04812
]
121414533
04147 Exosome [BR:
lvg04147
]
121414533
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121414533
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121414533
Cytoskeleton proteins [BR:
lvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121414533
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121414533
Exosomal proteins of other body fluids (saliva and urine)
121414533
Exosomal proteins of colorectal cancer cells
121414533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121414533
NCBI-ProteinID:
XP_041463677
LinkDB
All DBs
Position
4:complement(64440512..64448409)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDASRGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQIASA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIAQVVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYSPVVSAEKAYHEQLTVAEITNSCFEAAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGMDSIDPADEEEQDEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctcggtccacgtcggtcaagccggagtccagatcggcaatgcctgc
tgggagctgtactgccttgagcacggcatccaacctgatggtcagatgccctcggatgca
tctcgaggaggtggggatgattccttcaacaccttcttcagtgagactggcgctggcaag
cacgtccctcgagcagtcttcgtcgatctcgaaccaactgttattgatgaggttcgtacc
ggtacctaccgtcagctcttccaccctgagcagctgatcaccggcaaggaggatgctgcc
aacaactacgcccgtggtcattacaccgtggggaaagagcagatagacatcgtcctagat
agaattcgcaagttggctgaccagtgcacaggtcttcagggattcctgatcttccacagc
ttcggtggtggcaccggctccggctttacttctctgttgatggaacgtctctccgttgac
tatggaaagaagtccaagctggagttttccatctatccagcaccgcagatcgcgtctgca
gtagtcgagccatacaactccatcctgactacccatactacactggagcactctgactgt
gccttcatggtcgacaacgaggccatctacgatatctgcagacgtaacctcgacatcgag
cgtcccacctacaccaacctgaatcgtctcattgctcaggttgtctcctccatcactgct
tctctgcgattcgatggcgctctcaacgtcgaccttactgaattccagaccaacttggtg
ccttaccctcgaatccatttccctctcgctacctactcaccagttgtctcagctgagaag
gcatatcacgagcagttgacggttgccgagatcactaactcctgtttcgaggccgctaac
cagatggtgaagtgtgaccctcgtcacggcaagtacatggcctgctgtctcctgtaccgt
ggtgatgtcgtccccaaagatgtcaacgccgccattgctgccatcaagaccaaacgatcg
attcagttcgtcgactggtgtccaactggcttcaaggtcggtatcaactaccaaccaccc
accgtcgtccctggcggtgatcttgccaaggttcagcgtgccgtttgcatgttgagcaat
accactgcagttgcagaagcctgggcacgtcttgaccacaagttcgatctgatgtacgcc
aagcgtgctttcgtccattggtacgtcggagagggtatggaggaaggagagttctccgag
gctcgtgaggatatggctgctctcgagaaggactacgaagaagtcggaatggattctatt
gacccagcagatgaagaagagcaggatgaatactga
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