Lytechinus variegatus (green sea urchin): 121425860
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Entry
121425860 CDS
T11173
Name
(RefSeq) testis-expressed protein 10-like isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121425860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lvg03009
]
121425860
Ribosome biogenesis [BR:
lvg03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
121425860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
TPR_CAND1
HEAT_GCN1
MMS19_C
HEAT_GCN1_C
TPR_DNAAF5
HEAT_MROH2B_C
HEAT_EZ
HEAT_EF3_N
DOP1_C
TOR1L1_N
Cnd1
Adaptin_N
HEAT_DAAF5
PSME4_C
Motif
Other DBs
NCBI-GeneID:
121425860
NCBI-ProteinID:
XP_041477875
LinkDB
All DBs
Position
13:complement(33068910..33089536)
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AA seq
932 aa
AA seq
DB search
MGKSARKNKEKKKDFQKVKLKVGKKLAKADNVTDTTFKSRSIQIREQLKASANDGDQPVT
PRKQNIQELLCQVNHYNSSVRSNAIQGIKTLLTTNPSLIPEHLPALIPTLSTIMTDKEGA
VRQAGTTLLRVVMDTLASQQMSPFFPTICMHLCCAMTHIQEDVQLDSLSVMETVLQHYPG
LIAPHCKELLTNFIHLISQQRNKLGSSSSLKVNPSGKLAGQKWRLKVLQMLQKFLDVMRE
SKEKVFLPDRSNIHHTIKVKSEGGKPTYAPILKANGAFSGRPKPFILRNDQSASSLGVDF
LSDPDAILDVAKTLIPLLLQCWGEVNLPAKVKGQGGVTIGQKEEETLGCVLAILQTVWVI
LDRACGEKGNLSALDELRKTYQRKIGQQFQQGFPYALHQHAYTSNKKGNSKPPMGSSGAT
PINLSACNLVLSILVAEGNKPRPWMGMVREFVEDVLREEDGEYPLGQKEQEVLMDVVQRM
MGNPADDETIKSLEDALFVYYRRAHPLSQQKLRALKGLRSVCLDRARPDYDNVSEKLPTF
FDSLGMLIEEARSSPLGISQEALHTLLVAASRGHIQAVQCMEKHLPQWLSPDNALMDSLD
ESTQRRLLECLYYLPSLNSSIMKELTRYCCKTNSDVNLPVYIIANRCFDNVFGTCGRPPL
SHTDFIDFVFDVSMGTSSEDLSSLTYKMKSSEEKSESLHPFYHIIHGNREVELLRRAHAV
NKIAMQVYKRHPDPVKAMTRVLDLIQEALKTFRYLPLSTVLSFLEHAMLQRYMLEKSSSK
SPSSSSLGLQSVPPPGETSLDSMLGTLAFSLLYDALRRNAADLPREEEEYNMELRRLAVD
HVTSLRDESVGSLIDCALTVCKAHSDDRHVSSIIVHLLQNGNVRRSIQIHVNKLLELVHL
IEENLGAPNECRWLAELKYEVQLLVKDVQSDT
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagtgcaagaaagaacaaggagaagaagaaagacttccagaaggtcaagctc
aaggttggaaagaagttggccaaggcggacaatgtgacggataccacattcaagtcccgt
tctattcaaatcagagaacaattaaaggcatcagcaaatgatggagatcaacctgtcaca
cccagaaaacaaaacattcaagaacttctttgtcaagtgaaccactacaactcttcggta
cgcagcaatgccattcaaggaatcaaaaccctgctcacgaccaacccatccctcatcccg
gaacacctccctgccctcatccccaccctctccaccatcatgaccgacaaggagggggcg
gtgcgtcaggcaggtaccaccctcttacgagttgtcatggatacgcttgcatctcagcag
atgtcgccattctttcctacgatctgcatgcatctgtgctgtgcgatgacgcatatccaa
gaggacgtccagcttgattccttgtctgtcatggaaactgttctccaacactacccaggt
ttgattgctccccattgtaaggagctcctgacaaatttcattcatctcatctcccagcag
aggaacaaacttggtagctctagtagcctcaaagtcaaccccagtggcaagcttgccggg
cagaaatggagactaaaggtcctccaaatgctacagaaatttcttgatgtcatgagggag
tcaaaagaaaaggtgtttttaccagacaggagtaacatacatcacactatcaaggtcaag
tctgagggaggcaaaccaacatatgctcccatcttgaaagctaacggagcattcagcggc
agaccaaaaccatttatcttaagaaatgaccaatcagcatcaagccttggtgttgacttc
ctgtctgatcccgacgctatactggacgtggcgaagaccttgatcccactcctccttcaa
tgctggggagaggtcaatcttcctgcgaaggtcaagggtcagggaggggtcaccatcggt
cagaaggaggaggagacgttaggatgtgtgctagccatcttacagactgtctgggtgatc
ttagacagagcttgtggtgaaaaaggcaatcttagtgctctggatgagctgaggaagaca
taccaacgcaaaattggacagcagttccagcaagggtttccatacgcactccaccagcat
gcctatacctccaacaagaagggtaatagcaagccccccatggggtcatctggagccacg
cccatcaacctgtctgcttgtaaccttgtattgagtatcttggttgccgagggtaacaag
ccacgcccatggatgggcatggtgagggagttcgtggaggatgtgttgagagaagaagat
ggggagtatcccttgggtcagaaggagcaagaagtcttgatggatgttgtacagcggatg
atgggcaatccagcagacgatgagaccattaagagccttgaagatgccctgtttgtgtat
tacaggagagcccatcctctatcacagcagaagctaagagctctgaaaggtttaagatca
gtctgtctggatagagcaaggccggattatgataacgtatctgagaagctgccaacgttc
tttgatagcctgggtatgctgatagaggaagccaggtctagcccactaggtatctcccag
gaggcccttcatactctgctggttgctgcatccagaggtcatatccaagcagttcagtgt
atggaaaaacacttgccacaatggctttctcctgacaatgctttgatggacagtttagat
gaatcaactcaacgtcgtctgttagaatgtctttactatctcccgtccttgaactcatct
attatgaaggagcttaccagatactgctgcaagacaaactcagatgtgaacctacctgtc
tatatcatcgcaaatagatgctttgataatgtgtttggaacctgtgggagacctcctttg
tcacatactgacttcattgactttgtatttgatgtgtccatgggtacatcaagtgaagac
ttgtcatctcttacatacaagatgaaatcatcagaggagaagtcagaatcccttcatccc
ttctatcatatcatccatggcaacagagaggtggaacttctgcggagagctcatgctgta
aataagattgcaatgcaagtttacaagaggcaccctgatccggtaaaggccatgacaagg
gttcttgatctcattcaggaagcattgaagactttccgatatcttcctttatctacagtg
ttaagcttcctagaacatgccatgcttcaaaggtacatgttagaaaaatcatcctcaaag
tcaccctcatcatcatcattgggactccaaagtgtgccaccaccaggagaaacatcattg
gacagtatgcttggaacgttagcattctcattattgtatgacgccttgagaagaaatgct
gctgatttgccgagagaggaggaagaatacaatatggagctacggagactggccgtagat
catgtgacctcgttaagagacgagtcagtcggatcattaatagattgtgcactcactgta
tgcaaagctcactcagatgaccgtcatgttagcagcatcatagttcatcttctacagaat
gggaatgttaggagaagtatacaaatacatgtcaacaaactccttgaattagtacatctt
attgaggagaatttaggagctccaaacgaatgtagatggcttgctgagctgaaatatgaa
gtccaactgctagtcaaggatgtccaatcagatacatga
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