Lytechinus variegatus (green sea urchin): 121425950
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Entry
121425950 CDS
T11173
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-3-like
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121425950
Enzymes [BR:
lvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121425950
Ubiquitin system [BR:
lvg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
121425950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
EF-hand_6
EF-hand_7
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
121425950
NCBI-ProteinID:
XP_041478009
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All DBs
Position
13:complement(35160184..35179183)
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AA seq
446 aa
AA seq
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MASTSQQNEEEPGSSSVLNPIEEVRNMTWGSELKEDVFSRWSQGFVFSDDEPMALLQYEG
GPCAIIAPVQAFIIKNLLFSQESQCEDGSESWRQTNGDQRKHLLLCAMQDIICSVSNGNY
ILVLQEDKQELTIENVAGSSDGEPTHVTFHRNLRIQTYKSEDELRGALMTTYHMFVGDGG
VLLFLYSVLLTKGLAVIQDEVEDANEPLIDGIYGHGNQCLINLMVTGRAVSNVFDHEKDV
AGLQMKGISKQSLVGFMTILENLKYCEVGTLLKSPVYPIWLLASETHLTVFFSRELALVA
TETKWEKARRVFSEYDTEGSGFIQCAMLQSVLEALELVAVPEYVEFMTQRLDPEKCGIVL
QNTFMAEFFPDEPDRLLPEYFTVYHYNGIRRSNPHSKVMFLKGRGSAPNPGELEVLTEAT
PLKSCLRTKWPTFEANWENNVNPSIN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgacaagtcaacagaatgaagaagaaccagggagttcgtctgtccttaatcca
atcgaagaagttaggaatatgacttggggaagtgaattgaaagaagatgttttctcgcga
tggtcgcaaggttttgtattcagtgatgatgagcctatggcactgctgcagtatgaagga
ggtccttgtgcaatcattgcacctgttcaagcattcatcattaagaacttgcttttcagc
caagagagccagtgtgaagatggctcagaaagctggagacaaacaaatggggaccaacgt
aagcacctgctactctgtgcaatgcaagacatcatctgttcagtgtcaaatggaaattat
atactggtcttacaagaagataaacaagaattgaccatagagaatgtagctgggtcatca
gatggagaaccaactcatgtcaccttccatagaaatctcagaatacaaacctataaatct
gaagatgagctccggggtgctctgatgacaacataccatatgtttgttggggatggaggt
gttcttctctttctttactcagtgttactaacaaagggtcttgctgtaatacaggatgaa
gtagaagatgcaaatgaacccctcattgatggcatttatgggcatggaaaccagtgtttg
ataaacctgatggtgactggtcgagctgtttcaaacgtctttgatcatgagaaagatgta
gctggtctacaaatgaaaggtatctcaaagcagtcgttggttgggtttatgacgattcta
gagaatcttaaatattgtgaagttggaacacttttaaagagtccagtttaccctatttgg
ttgcttgccagtgagacccatttaacagttttcttctctcgggagttagcgctggtcgct
actgaaaccaaatgggagaaagcaagaagagtcttcagcgagtacgatactgaaggtagt
ggttttatccaatgtgccatgcttcagagtgtccttgaggccctagaacttgtagccgtg
cctgaatatgttgagttcatgacccagcgtctagaccctgagaaatgtggtattgtcctt
cagaatacgttcatggctgagttctttcctgatgagcctgacaggttattaccagagtac
tttacagtgtatcattacaatggtataaggagatcaaatccacattctaaagtgatgttt
ctaaagggtagaggctccgcccccaaccctggtgagctggaggtcctcacggaagctaca
ccccttaaatcttgcctgcggacaaaatggccgacattcgaggccaattgggaaaacaat
gtgaacccgtctatcaattga
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