Lytechinus variegatus (green sea urchin): 121426004
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Entry
121426004 CDS
T11173
Name
(RefSeq) integrin alpha-9-like
KO
K06585
integrin alpha 9
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04512
ECM-receptor interaction
lvg04518
Integrin signaling
lvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121426004
04518 Integrin signaling
121426004
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121426004
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lvg04515
]
121426004
Cell adhesion molecules [BR:
lvg04515
]
Integrins
Integrin alpha subunits
121426004
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_1
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
121426004
NCBI-ProteinID:
XP_041478067
LinkDB
All DBs
Position
13:30030130..30074254
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AA seq
1097 aa
AA seq
DB search
MKVDKWRVYTILTSDQMPVRQSMDLDVALWTKHVVGAPRGTQSSGLGQNAEKPGSLFECT
VGESVRCRSITIDNPFGTNAESLEREGIVDYPDNGWIGVSIAHQQGANNELTVCGHRYGN
NYAIDQPNADLSDVKIDRYTQGICITLDSGLEDVYTRFNPCAEESAWRDDIVANESTRWQ
GWCQFGMSAAYAKDGEDSETFVAGAPGSYDWTGTVFKQLIDTNNQMNSGELRDWNTDYSY
DDFFQYVGYSTTVGYFRTNTTQQGASGAPRAGGLVGKVYIHDLQTFQVYQELQGEMMNTY
FGGAVAALDINGDGFSDLLVGAPLYSVDQDEGRVYVYINSGGMNPDLVLHQTLDGTSTPG
SRFGHAIVSLNDITDDLLPEIAIGAPYEGGGVVYIYQCIAGGVDEAYLQRIDGRDTDPNV
QTFGSAIAGGGDIDDNFYPDLAVGAYASDSVFVYKTRPLLDLEVTLTVTPDPLDPKNPSC
IDSEGTCIEIAVCFTYSGPRKEALPQYIDVIFDIELDKEKTAAGFKPRFLLQNGTDMLNE
LGATKQIRMNVDICFNYKAYLQSTASDFLSPVPVDLTYILRDYEHEGPPRQDRPRQFPYG
IPPLMLSPQCRSITTVEDVNFVRDCGVDALCRTDLKLIANVSIEGNPTEIISGGPSRLYV
NARVENDGEEAHQAVLTVTHPYDMRYEGLETNQLSCLDDNECDARALVLCEPTAAGVKCN
LGNPMNSYTVSTLRLRFDIGGLIYDPGRIVNIVISANTSSLQTPDSLADNILEVNYELVI
GADVGIFGSSTPESVYYVSNGSNYATAQAAEKSLQAAVNMSLISPSSPSFNDTHIGSPFT
LSYQITNDGPGQLPFSSVVTIHIPWRMLNGDWLIFIKSINIIDRTNTGSCNGDEIIELQN
RRLLERYRDTSFYRDPAPEEDISPIFGTGEGNQQLGCTKAKCVALTCYINQMQARQVVEV
RIDAIPWEHTIITRRLGYVEILTEAEFVAQSPSGSFGQGEDANPDRIQLPIKLYTEMKGA
GELPVWIIIVSILAGLILLIVLILLLWKCGFFKRKTRKDWEEEADGAAPMPIKPPVDPTG
ELDGSDLPMMKGLAAKE
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtagacaagtggagagtttataccatcttgacatcagaccaaatgccagttcga
caaagcatggacctcgatgtagctctgtggacaaagcatgtagtgggtgcacccagaggt
actcagtcgtcgggattagggcagaatgcggagaaaccaggaagcctatttgaatgcact
gtcggagaatccgttagatgcaggtctatcacaatcgacaatccttttgggacaaatgct
gagtcccttgaaagggaagggattgtggattatccagataatgggtggattggcgtttct
attgctcaccaacagggggcaaataatgaactcacagtctgtggacatcgttatgggaat
aactacgccatcgaccagcccaatgcagacctttctgatgtaaagatagatcgttatacc
caaggtatatgcatcacactagactcaggtttagaagatgtgtataccaggtttaaccct
tgtgcagaagagagcgcatggagagatgatatagttgcaaatgaatcaacacgatggcaa
ggttggtgccaatttggtatgagcgcagcttacgcaaaagatggtgaggattcagaaacc
tttgtcgccggtgcacctggatcatatgactggactggtactgtattcaagcaactaatt
gacacaaataatcaaatgaattctggtgaattaagggactggaatacagactattcatat
gatgacttctttcaatatgtcggttactctacaactgtgggatatttcagaacaaatact
actcaacagggtgcttcaggagcgcccagggcaggagggttggttggcaaagtttacatc
catgacctgcaaacatttcaagtttatcaagagttacaaggggagatgatgaatacatac
tttggaggtgcagtagctgctctggatatcaatggagatggcttctctgatctccttgtc
ggtgccccactgtattccgtagatcaagatgaaggcagagtctatgtttacatcaacagc
ggaggtatgaatcctgatcttgtactccatcaaacgcttgatggtacatcaactccaggc
tccaggtttggccatgctattgtcagtctcaacgacataacggacgatcttcttccagaa
atagcgattggggcaccatacgaaggaggaggagtggtatacatataccagtgtattgca
ggcggagtcgacgaggcatacttacagaggattgatgggagagatacggatcctaatgtt
caaacctttggaagcgccatcgctggaggaggggatattgacgataacttttaccctgat
cttgctgttggagcttatgccagtgattctgtctttgtctacaaaacgagacccctgctt
gaccttgaggtcacgctgacggtgacccctgaccctctcgatccaaaaaatccatcgtgc
atagattcagaaggtacttgcatagaaattgcagtctgcttcacctactctgggccaaga
aaggaagcgttacctcaatatatagatgtcatctttgacattgagttggacaaggagaag
accgcagctggattcaagcctcgattcctgctacaaaacggaacagatatgttaaacgag
ttaggcgccacaaagcagatccgtatgaatgttgatatatgcttcaattacaaagcatac
cttcagagtactgcatcagactttctcagccccgttcccgttgatctgacttacatcctg
agagactatgagcatgaaggaccaccgcgtcaagatagacctcggcagtttccgtatgga
atccctcccttaatgctcagccctcaatgccgatccatcacaacagttgaagatgtcaat
tttgtgagagattgtggtgttgatgctctctgcagaactgatctgaagcttatagccaat
gtctcaattgaaggaaatccaacagagattatttctggtggtccatccagactgtacgtc
aacgccagagtcgagaacgacggggaagaggcgcatcaggctgttcttaccgttacccac
ccttatgacatgagatatgagggtcttgaaactaaccagttgtcttgccttgatgataat
gaatgcgatgcaagagctcttgtactttgtgaaccaacagcggctggtgtgaaatgcaac
ctgggaaatcccatgaattcttacacagtgagcactctccggcttcgcttcgacatcggg
ggtcttatctacgaccctggtagaatcgtcaacattgtgatatcagctaacactagtagt
ttgcagacccctgacagcctcgctgacaacatccttgaagttaattatgagctggtcata
ggtgcagatgttgggattttcgggtccagtacccctgagagtgtatactatgtcagtaat
ggttcaaactacgccactgcacaagcagctgagaagtctctccaagcggccgtaaacatg
tcgcttatatcgccgtcatcgccttccttcaacgacacccacattggaagcccgttcaca
ctctcataccagatcaccaatgacggtcctggtcaactaccattctcttctgtggtcact
attcacattccatggcggatgctcaacggcgattggcttatcttcatcaaaagtatcaat
ataatagatagaacgaacactggatcctgcaacggtgatgaaataatagaactccagaat
agacggctcctagagagatacagagatacctctttctatcgtgatcccgcccctgaagaa
gatatatcgcccatctttggcactggcgagggcaaccaacaactgggatgcactaaagca
aagtgtgtagcattgacgtgttatattaaccagatgcaagcacgtcaagtcgtggaggtt
aggatagacgctattccgtgggaacacaccattattacgagaaggctcggctatgttgag
atcctgacagaagccgagtttgttgctcaatcaccgagtggaagttttgggcaaggagaa
gatgccaacccggataggatacagcttccaatcaagctttacaccgaaatgaaaggtgct
ggtgaattacccgtctggataatcatcgtcagtatacttgctggtctcattctactcatc
gtcctcatactcttattatggaagtgtggcttcttcaagagaaagactcgcaaggactgg
gaagaagaagcagatggtgccgccccgatgcccatcaaacctccagtagaccctaccggc
gaactagacggctctgatttaccaatgatgaaaggactggcagccaaagagtaa
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