Lytechinus variegatus (green sea urchin): 121426472
Help
Entry
121426472 CDS
T11173
Name
(RefSeq) transient receptor potential-gamma protein-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lvg04040
]
121426472
Ion channels [BR:
lvg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121426472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
PKD_channel
Motif
Other DBs
NCBI-GeneID:
121426472
NCBI-ProteinID:
XP_041478727
LinkDB
All DBs
Position
13:6077552..6116741
Genome browser
AA seq
802 aa
AA seq
DB search
MSILQEPNDEGVPDGPRDTEILKKKFLRLVRNGDAQSVEAMVRDPVNIKVSKALWSFGMQ
VAIQHKHLDVLRTLIACKVPIEDALLHAIESRNVEVVMEIINLPDDVSMHNYIADSKGCD
LINRFAVTNNFPPCTTPLILASRIDDLTIVQLLLDNGATMPTEEETLARVKDDSLERALA
RLQWYQSMTSNSYILLTADDAIETALSWGERLKERTRHERQVFASCYDVIHKRLELLLTR
LLDCATCKDEIWEALNERAETGGSRRSVSRRGLPTDPMGRLKRVVRLKYQTFVSHSYCQE
YMLRWWYADCPIPWGYCGEISRIFLVILIVVLFPFIGILNIILPENVRCVRWFDKLMATP
FVQHILQTCSQIFFLHALLYMTMGISISLVECPDFVSFRHDPTGYQCTKYTYTIFPLGSR
FIIVLLWVIGMSWRHVTLVYAQGLKTYLSVYWHIVDFATIAFHWAYIALTITISKIGVND
EIYQNNTVALSSHSFFNLDKAFHFHFDKYEVSRYGWDTFDPQLVAEICFSVANVLSCMRL
LHATISFQFVGPLQISFGAILVDMGRFFCLLIFVLIAFGLGFTQLYATYNTENDVVCQAD
PTSDACTRVSFENIFTSVATLFWAIYGETTTSSLKLPANLWFTQMVGIVLYGIYVTLVVT
IMLNALIAMLSNTYSRVEENARKEWHFARTKMMLEYDNQAGSLPPPFNIIPRVGYWVQTA
CRVLRGITIAIIRFKTSDVVLIRMRKASEAPGTERAPKIRLGRDRHLKHTVYNRRIGDKI
LANRLLQCMQCDPENSHNLIYY
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgagtatattgcaggaacccaacgatgagggcgtcccagatggacccagagacactgag
atactgaagaagaagttccttagattggtccgcaacggggatgctcagagtgtcgaggcc
atggttcgagaccctgttaacatcaaggtttcaaaagcgctctggagtttcggaatgcag
gtggccatacagcacaaacacttagatgttctgagaaccttgattgcttgtaaggtacct
atagaggacgccctacttcatgccatcgaatcccgcaacgttgaggttgtcatggagatc
atcaatctgccggacgatgtatcaatgcataactatatagcagacagtaaagggtgtgac
ctgattaatagatttgcggtgacgaataatttcccaccttgtactactccgctcatctta
gcttcaagaatagatgacttgaccattgttcagttgctccttgacaatggggcgactatg
ccgacggaagaggagacactcgcacgcgtcaaagacgactcactagagcgcgccctcgct
cgtctgcagtggtaccaatccatgacaagcaactcgtacatcctgttgaccgccgacgac
gccatcgaaacggcgctgtcttggggcgagcggctgaaggaaaggacccggcacgagcga
caggtgtttgcttcatgctatgacgtcatacacaagcgactggaactgctgctcactcgg
ctgctcgactgcgcaacgtgcaaggatgaaatatgggaggccctcaacgagagagccgag
acaggtggatctcgacggagtgtgtcgagaagggggttacccacggatccaatgggacgt
ttaaagcgagttgtgcgattgaagtatcaaacgtttgtatcgcacagctactgccaggag
tatatgttgcgatggtggtatgctgattgtcctatcccatggggatactgcggagagatt
tcacgtatcttcctcgtgatcctcattgtcgtcttatttccattcatcggtattttgaat
atcatcctcccagaaaacgtacgctgtgtacgatggtttgacaagctgatggccactcca
tttgtacagcacatcctccagacgtgttcccaaatcttctttcttcacgcactcctatac
atgactatggggatcagtatttccctcgtcgaatgcccagacttcgtcagctttcgtcat
gacccaacaggataccaatgcaccaaatatacctacacaatcttcccgttggggtcgcgc
ttcataatcgtacttttatgggtaatagggatgagttggcgccatgtgaccctagtctac
gctcaaggcttgaagacatatctctcagtgtactggcatatagttgatttcgcaacaatc
gcctttcactgggcgtatatagctctaacaatcacgatcagtaagatcggagtgaacgac
gaaatataccaaaacaacactgtggcgctatcttcacattcatttttcaacctcgataag
gcattccacttccattttgacaagtacgaagtatcgaggtatggatgggacactttcgac
ccccagctcgtcgcagagatctgcttttcagtggcaaacgtcttgtcgtgtatgcgtcta
ctccatgcaaccatatccttccaattcgtgggccctctacagatatcgtttggcgccatt
ttagtggatatggggcgtttcttctgtctcctgatcttcgtgctaatcgccttcggtctc
ggtttcacacagctctatgcgacctataacacggaaaacgatgtcgtctgccaggcggac
ccgacgtcggatgcctgtacgagggtttcttttgaaaatatcttcacgtcggtcgcaact
ctgttctgggcgatttacggcgagacgaccaccagctccctgaaactcccagccaaccta
tggttcacccaaatggtgggaatcgtcctttacggcatctacgtcaccctcgtcgtcacc
atcatgctcaacgccctgatcgccatgctcagcaatacctactctcgcgtcgaggagaac
gcgagaaaggagtggcattttgcccggacgaagatgatgcttgagtatgacaatcaagcg
ggaagtttacccccaccctttaatatcatcccgagggtggggtattgggttcagacggca
tgtagggttctcagaggaatcaccattgccataatcagattcaagacaagtgatgtggta
cttatcaggatgcggaaggcaagcgaagcacctggtacggaaagggcacctaaaatacgg
cttggtcgtgatcgtcatctcaaacacacagtctacaacagaagaattggagacaagatc
ttggccaatcgtctgttgcagtgcatgcagtgtgatcccgaaaatagccacaaccttatt
tattactga
DBGET
integrated database retrieval system
