Lytechinus variegatus (green sea urchin): 121427677
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Entry
121427677 CDS
T11173
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121427677
Membrane trafficking [BR:
lvg04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
121427677
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
Ig_3
ig
LRR_9
V-set
LRR_14
Ig_2
LRR_6
LRR_LRWD1
LRR_Zer-1
DHU1_N
Motif
Other DBs
NCBI-GeneID:
121427677
NCBI-ProteinID:
XP_041480131
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All DBs
Position
14:18557727..18574445
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AA seq
643 aa
AA seq
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MQYMTSSMSPVLLSVFLILCQVLDPTAAIGCIRPPSCDTDEEAGFASMLCGQRRLNCIPQ
EQHHARFLDMHGNRLTNLLQDAFRQFYNLERLDLSSNEIASITPGAFSGLHNLTSLILKG
NRIQSLSASTFSGATKLETLDLSRNNISTITVGAFNGLSQLRTLYLNENQLDWLRPGMLQ
GLPRLALLSFHSNGMRTIDAAAFRGLTHLRALQLNNNNIATMDNVFNSLPSLSTLWIGEN
PWECDCRMEFLRRLLVPRHAGAAGVLDVRHPVICTGPSLMRGLDMRYVNDPLQCTRPIFK
REKFEYLIARGQDVSMTCDASGIPSPALSWVSPRGEPIPSITVGTANMNYAHAPRISVRS
DGSLNIRHAQHKDAGNYTCLAQNPGGQAMAEIRVTVVNEIPKPTVSAPGKTTPDMWPRKP
TGGNEPEGGWPNQERPPIACIPERSRACDSATGVVVTAIVTFLTTLITCVVVFYLWYRKQ
TAKIHFASAPLPNTQKAPRNQSSMKPTLQRFINAISNPAHLYAKPKPAKNQRPGGFSFHK
ASNKVDDASRHIIAPLTEKPSILSQGMPEMDAPTPPPMTGMNRSHPKQTDQKRLSVPREL
LRNSATISRSSHLYENATALNDDPNYTALDPMTRCIINDTYVS
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacatgacgtcatcaatgagccctgtgctcctgagtgtctttcttatcctatgc
caagtacttgatcccaccgctgccatcggttgtatccgaccaccgtcctgcgatacagac
gaggaagcaggctttgccagtatgctctgcggtcaaagacgtctgaactgtattcctcag
gaacagcaccatgcacgcttcctggacatgcatggcaataggttaaccaacctgcttcaa
gatgccttccgacagttctacaaccttgagagactcgacctgagctccaacgagattgcc
tccatcactcctggggcattctccggactgcacaacctcactagcttgatcctgaaaggg
aacaggatccagagcctcagcgccagtactttctcgggtgcaaccaagttggagaccctt
gatctgtccaggaataacatatccacgatcactgttggagcttttaacggcctgagccaa
ctcaggacgctctatttgaacgagaaccagttagattggctaagacctggtatgctccaa
ggtcttcctagacttgcccttctatccttccacagcaatggtatgcgtacaattgatgca
gctgccttccgaggacttacgcaccttcgtgctcttcaactaaacaacaataacatcgcc
acgatggacaatgtcttcaactccttgccatcactgtcaacgctgtggattggtgaaaac
ccatgggagtgtgactgtcgaatggagttcctcaggaggctgttggtgcccaggcacgcc
ggtgctgctggtgtcctggatgtacgacaccctgtgatctgcacaggtcctagtctcatg
aggggacttgatatgagatacgtcaacgaccctcttcaatgtaccagaccaattttcaaa
agggaaaagttcgagtatcttattgcgagaggacaggatgtctcgatgacatgcgacgcc
tcgggcatcccttccccagccttgtcgtgggtaagccctaggggtgaacccatcccctcg
atcacagtgggtacagccaacatgaactacgcccacgcaccccgcatcagtgtccgcagc
gacggatccctcaacatccgacacgcccaacacaaggacgctggaaactacacctgcttg
gcgcagaaccccggcggtcaagccatggccgagatccgggtgaccgtcgtcaatgaaatc
ccgaagccaactgttagtgcgccagggaagacgacccctgacatgtggccgaggaaaccg
acaggcggcaatgaaccggaaggaggttggccaaaccaggagcgtccacctatcgcgtgt
atacctgaaagatcccgcgcgtgcgattctgcaacaggtgttgtcgtaacggccatcgtg
acatttctcacgaccctgatcacgtgcgtggtagtcttttacctctggtatcgaaagcaa
acagccaaaatccactttgcttcggcgccactcccgaacacgcagaaagctccgaggaat
cagtcatcgatgaaaccgacacttcaacgttttatcaacgccatctccaaccccgcgcac
ctgtacgccaagcccaagccagccaaaaaccagcgcccgggcggattcagctttcacaaa
gccagtaacaaagtggacgacgcgagcagacacattatagctccgctgacagaaaagcca
tccatcctcagtcaaggcatgcccgaaatggatgcgcccacgccaccgcctatgaccgga
atgaaccggtcacacccgaagcaaaccgatcagaagaggttaagtgtcccgagagaactg
ctccgaaacagcgccacgatatctcgatcttcacacctatacgagaacgcaaccgcttta
aatgacgatccgaattacacagcgcttgatcccatgacaagatgtataatcaacgacaca
tatgtgtcctag
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