Lytechinus variegatus (green sea urchin): 121429766
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Entry
121429766 CDS
T11173
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00280
Valine, leucine and isoleucine degradation
lvg01100
Metabolic pathways
Module
lvg_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
121429766
Enzymes [BR:
lvg01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
121429766
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
BT_MCC_alpha
Biotin_lipoyl_2
ATP-grasp_3
RimK
ATPgrasp_ST
HlyD_D23
GARS_A
ATP-grasp_4
DUF2620
RnfC_N
Motif
Other DBs
NCBI-GeneID:
121429766
NCBI-ProteinID:
XP_041482907
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All DBs
Position
16:20884832..20907389
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AA seq
705 aa
AA seq
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MASSLILQLNSRKFAELTRKLGWQAGCLSRSVSTASISKVLIANRGEIACRVIRTARKLG
VKTVAVYSDADRNSMHVAMADEAYHIGPAASQLSYLNKQKIIEVAKASGAQAIHPGYGFL
SENTEFADLCDKEGVIFVGPPSSAIRDMGIKSTSKHIMSAAGVPIIEGYHGEDQSKERLR
QEAERIGYPVMLKAVRGGGGKGMRIVKTEADFDEALESAMREAKKSFDDDIMLVEKFVET
PRHVEVQVFGDKHGNYVYLFERDCSVQRRHQKIIEEAPAPHLSEEVRKRIGEAAVQAARA
VNYVGAGTVEFIMDAQQNFYFMEMNTRLQVEHPVTEMVTKTDLVEWQLKVAAGETLPITQ
DDLRLHGHSFEARIYAEDPDNGFLPGAGPLIHLATPSADESIRIETGVRQGDDVTPYYDP
MIAKLVVWSHDRKSALDKLRKCLHDYQIVGLKTNIRFLDDLAKHPEFGQGHVHTDFIPQF
EKELFPERGALNDQTLCRAVLALVLYEQRCSSVEGLDSSDPFSPYSQGNGLRLNDEMLRR
VKLKSGETDLEATVTYHSDQGYSVKVGDASYNVQGTLTGQGNALQMTSTVDGQKTTSTVI
MHEDSIHLFSPEDIGGVEVTKPVPDFMQASGSQGHGDLAPMPGDITHVYVNPGDHVEKGQ
PLLALESMKMEYVIRAPKDGVIDRILVAKGDNVQKHAPLVAYQDK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctctgatattgcagctgaattcgagaaaatttgcagagttgaccaggaag
ttaggatggcaagcaggatgtttatccagatcagtttctacagcatctatcagcaaggtt
ttgatcgcaaacagaggtgagattgcctgccgcgtgatccgcacagctaggaagctcggt
gttaaaacagttgcagtctacagcgatgcagacagaaactccatgcatgttgccatggct
gatgaagcttatcacataggaccagccgcttctcagctcagctacctcaacaaacagaag
atcatagaagtggcaaaggcatcgggtgctcaggccatccatcctgggtatggtttcctc
tcagagaatacagagtttgctgacctctgcgacaaggaaggtgttatctttgttggacca
ccgtcatcagctatcagggatatgggcatcaagagcacatccaagcacatcatgtcagca
gctggcgtgccaatcattgagggttaccacggcgaggaccaatcaaaagagagattgagg
caggaggcggagcgtataggatatcccgtcatgctgaaggctgtcagaggtggtggagga
aagggtatgcgtattgtgaagacagaagcagattttgatgaggccttggagtcggctatg
cgagaggccaagaaatcttttgatgatgacatcatgctcgttgaaaagtttgttgagacc
ccaaggcatgttgaagttcaggtatttggagacaagcatggaaactatgtgtacctgttt
gaaagagattgcagtgtgcagagaagacatcaaaagattattgaagaagcaccagcgcct
catctatcagaagaagtaagaaagagaataggagaagctgctgtacaagctgcaagggct
gtcaactatgtaggagcaggtaccgtagaattcatcatggatgcacagcagaacttttac
ttcatggagatgaacacaagactccaggtcgaacaccctgttacagagatggttaccaaa
acagatctagtcgagtggcaactaaaggttgctgcaggagaaacgttaccaattacccag
gatgacctccgtcttcacggacactcctttgaagctcggatctacgccgaggatcccgat
aatggattcctccccggggccggtcccctcatccacctagccaccccgagcgcagatgag
tcgataaggattgagactggtgtgagacaaggtgatgacgtgaccccctactatgatcca
atgattgctaaacttgtagtgtggtcacatgatagaaagagtgctctagataaactcagg
aagtgtcttcatgactaccagattgttggactaaagaccaatatcagattccttgatgac
cttgccaagcatccggagttcggccaaggtcacgttcacaccgacttcattcctcagttt
gagaaggaactgtttccagagcggggcgccctcaatgaccagacactgtgcagggccgtc
ttagctctggtactctacgagcagaggtgtagcagtgtggaaggtctcgacagtagcgat
ccattttcaccttacagtcagggcaatggcctaaggttgaatgatgaaatgcttaggcga
gtgaagttgaagtctggagagacggatttagaagcgaccgtcacataccattctgatcaa
ggttactcggttaaggttggagatgcctcctataatgtccaaggaacactgaccggccag
ggtaatgcccttcagatgaccagtacagtggacggtcagaagactacatccactgtcatc
atgcatgaagatagtattcacctcttttcaccagaggatatcggaggtgttgaggtaacc
aaaccagtcccagacttcatgcaggcgtccggctctcaaggtcacggtgaccttgcccct
atgcccggtgatatcacccacgtctacgtgaacccaggtgatcatgtcgagaaaggacag
cctctcctggccttggagtcgatgaagatggagtatgtgatccgagcaccaaaggacggc
gtcatcgaccggatcctggttgccaagggtgacaacgtccagaaacacgcccccttagta
gcctaccaggacaagtaa
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