Lytechinus variegatus (green sea urchin): 121430030
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Entry
121430030 CDS
T11173
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121430030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvg02000
]
121430030
Transporters [BR:
lvg02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
121430030
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
121430030
NCBI-ProteinID:
XP_041483235
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Position
16:complement(31271828..31284302)
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AA seq
541 aa
AA seq
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MAIQWGGVAALVVFYLLIFAVGIWASRKIKGSANTERAMVADRDFGWGVGLFTLIATWVG
GGYINGTAEIVFTPGWGLVWAQAPWGYSLSFVINGLFFAKQMRSANYVTMIDPFQIKYGN
RMGGLLFLAALTGELLWCAAILAALGSTISVILELDQNLSVIISACIAAAYTIFGGLFSV
AYTDIIQLICIFVGLWICLPFAMTNAAVTPIKDTTDRWVGEWDVRTTGQWVDSFLLILLG
GVPWQAYYQRALSAKSADHARYLSFAASIGCIIISIPAYIMGAVGASTDWNMTAINLNKT
DPYKTPEIVLPAVVQFLTPPVVAFLGLGAISAAVMSSTDSSVLASSSMFVRNIYKNILRT
SASELELLWILRLTVLIVATLATVLALTVESIYILFVLCSDFVYVVLFPQFVCVVHIEKS
NTYGSFVAFILGLFLRLAGGEPALNLPVLIRYPYYDEELGQLFPFRTLAAIVSFVSLVVI
SCITDVVFKRGFLHEKYDIFKCVVDTEVKSTKEVFAKSTSGPMGMTEDKCVGIDNVAMTD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctatccagtggggtggagtggcggcgctggtggtgttctatctgctcatcttcgct
gtcggaatatgggcatccaggaagatcaaagggtctgctaatacggagagagcaatggta
gcagacagagattttggctggggcgttggcctttttacgttgatcgcgacatgggtggga
ggaggttacatcaatggaacggcagagatcgtttttacccctgggtggggtctcgtatgg
gcccaggcaccgtggggctacagtctcagtttcgtcataaatggccttttcttcgccaag
cagatgagatcggctaattacgtcacaatgatagacccgtttcagatcaagtatggcaac
cgaatgggcgggcttctgtttttggctgcactgacaggagaattgctgtggtgtgccgcc
attttagcagcgctgggatcaactatcagcgtcatcctagagttggatcagaatctttcc
gtcatcatctcggcatgcatcgctgcagcatacacgatcttcggcgggcttttctcagtg
gcctacactgatatcatccaactgatctgtatattcgtcggtctgtggatctgtttaccc
tttgcgatgaccaatgctgctgtcacacccatcaaagatacaacggatcgctgggtaggc
gagtgggacgtcagaactactggacagtgggttgatagtttcctactgattctcttaggc
ggagtaccttggcaagcttactaccaacgggctctatcggccaagtcagctgaccacgcc
cgttacctctcatttgctgcatctattgggtgtatcattatcagcatccccgcctacatc
atgggtgccgtcggagccagtacggactggaacatgacggccattaatctgaataaaacg
gatccatataagacacccgaaatcgtcctccccgccgtcgtccagttcctcacccctccc
gtggtcgccttcctcggccttggggccatatcagccgcggtgatgtcgtccaccgattcg
tctgtcctcgcctcgagttccatgttcgttaggaacatctacaagaacatcctcagaact
tctgcatcggagctagagctgctttggattcttcgactcacagttctcatcgttgcaacc
ctcgctaccgtcttggctctgaccgtcgagtctatctacatcctcttcgttctctgctcc
gacttcgtttacgtcgtactctttccgcagtttgtgtgcgtcgtccacatcgaaaaatcc
aacacatacggctcctttgtcgcgttcatcctcggtctctttctccgacttgccggtggg
gagcccgccctcaacctcccagtcctgataagatacccatactacgatgaggaactcggt
cagttgttccctttccgaactctggccgcgatcgtgtctttcgtgtccctggtcgtcatc
tcgtgcatcaccgatgtcgtttttaagagaggttttcttcacgagaaatacgacatcttt
aaatgtgtggtcgataccgaagtcaagtcgaccaaggaggtcttcgccaaaagtacttcc
ggtcccatgggcatgacggaagacaagtgtgtcggcattgacaacgtagccatgaccgat
ttctag
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