Yoonia vestfoldensis: LOKVESSMR4R_02435
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Entry
LOKVESSMR4R_02435 CDS
T04854
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lvs
Yoonia vestfoldensis
Pathway
lvs00521
Streptomycin biosynthesis
lvs00523
Polyketide sugar unit biosynthesis
lvs00541
O-Antigen nucleotide sugar biosynthesis
lvs01100
Metabolic pathways
lvs01110
Biosynthesis of secondary metabolites
lvs01250
Biosynthesis of nucleotide sugars
Module
lvs_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LOKVESSMR4R_02435 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LOKVESSMR4R_02435 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LOKVESSMR4R_02435 (rfbC)
Enzymes [BR:
lvs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LOKVESSMR4R_02435 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ARU01739
UniProt:
A0A1Y0EE95
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Position
complement(2424262..2424825)
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AA seq
187 aa
AA seq
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MIFNPTPLDGAYTIDLEKRGDDRGFFARFFCETEFREAGLETDFVQVNNSLTAKAGTLRG
LHYQLPPAAEVKVVRCIRGALWDVILDLRAGSPTFGKWFGAALSAENRTMMYVPRGFAHG
FVTLTDDTEALYLVSAFYAPDAERGVRYNDPAHGIEWPIAPVEISDKDRNWPDLDAAFHG
FETMRGA
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcaatccgacaccacttgatggcgcctataccatagatctggaaaagcgcggt
gacgaccgtggattttttgcgcgcttcttttgcgaaaccgagttccgtgaggcgggcctt
gagacagatttcgtacaggttaacaattctctgaccgcgaaggcgggcactttgcgcggc
ctgcattatcagttgccacccgcagcggaggtgaaggtcgtgcgctgcatccggggcgcg
ctttgggatgtcatcctcgatctccgcgcaggatcgccgaccttcgggaaatggtttggt
gccgcactttcggccgaaaaccggacaatgatgtatgtgccacgtgggtttgcgcatgga
tttgtgaccctgacggatgacacagaggcattgtatctggtcagcgctttttacgcacct
gatgccgaacgcggggtgcgctacaatgaccccgcgcatggcatagaatggcccatcgcg
ccggttgaaatctcggacaaggaccgcaactggccagatcttgacgctgcgtttcatggg
tttgaaacgatgcggggcgcgtga
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