Legionella waltersii: SAMEA4504053_3268
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Entry
SAMEA4504053_3268 CDS
T06599
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lwa
Legionella waltersii
Pathway
lwa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lwa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4504053_3268 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lwa03019
]
SAMEA4504053_3268 (pnp)
03016 Transfer RNA biogenesis [BR:
lwa03016
]
SAMEA4504053_3268 (pnp)
Enzymes [BR:
lwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SAMEA4504053_3268 (pnp)
Messenger RNA biogenesis [BR:
lwa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SAMEA4504053_3268 (pnp)
Transfer RNA biogenesis [BR:
lwa03016
]
Prokaryotic type
tRNA degradation factors
SAMEA4504053_3268 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_2
Motif
Other DBs
NCBI-ProteinID:
SNV13202
LinkDB
All DBs
Position
1:complement(3451946..3454138)
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AA seq
730 aa
AA seq
DB search
MAKIIREIVLGEHTLVLETGEVARQADGAVMANMNGTQVLVTVVWKKDGGENNDFFPLTV
NYQEKFYAAGKIPGGFTKREGRPSDNETLISRLIDRPIRPLFPDNFHNEVQVIATVLSLN
PDVSPDIVSMIAASAALAISGVPFNGPIGAARVGYKDGIYLLNPSRKELTDSKLDLVIAG
TKDAILMVESEAKELSEDIMRGAMMFGHEMMKGVIKAIEEMATAVGKQQIEWQAPEIDTV
LQERVSQIARKEVEEAYLIKDKQQRYQRLDELREQTVAALTAENDELKAEVIAGMFGSLE
SSIVRNRILDGEPRIDGRDHKTVRPIAVRTKCLERTHGSCLFTRGETQAIVVATLGNERD
AQMLDGISGESKDRFMLHYNFPPYSVGETGQVGSPKRREIGHGRLAKRALLAVLPEASEF
PYVLRVVSEITESNGSSSMATVCGTSLALMDAGVPLKAPVAGVAMGLIKEGERFAVLTDI
LGDEDHLGDMDFKVAGTENGITALQMDIKISGITNEIMEQALDQALAGRMHILGVMNNAL
AEPRAELSEHAPRITTMKVAEDKIRTIIGKGGATIKGLIDSTGVAIDIDDSGVVQLFSPD
KMALEEAQRQIKLLVAEIEVGQTYQGKVSKIVDFGAFINLLPGKDGLLHISQICSDRSQK
VESILQEGQDIEVFVAGIDKQGRVKLEWKDKPQGTDPQSEQNQVEMVEESATAIDSEELA
VAHPKSSEEE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaattattagagaaattgtattaggcgagcatactttagtattagaaacaggg
gaagtggctagacaggctgatggtgctgtaatggccaacatgaatggcactcaggttctg
gttactgtggtttggaaaaaggatggcggggaaaacaatgacttttttcctttaacagta
aactaccaagagaagttttatgctgcaggtaaaatacctggtggttttacaaagcgcgaa
ggtaggccatctgataacgaaacattaatatctcgtttgattgacagacctattcgtcca
ctgtttccggataacttccataatgaagttcaagtcattgcaacagtactttcattaaat
cccgatgtttcacctgacatcgtttctatgatagctgcgtcagctgccctggcaatttct
ggtgttcctttcaatggtccgattggtgctgcaagagtcggttataaagacggtatctat
cttttaaatcctagtagaaaggaactaactgattctaagcttgatttagtcatcgctgga
accaaagatgctatcttgatggttgagtcagaagcgaaagaattaagtgaggacatcatg
cgtggtgcaatgatgttcggccatgaaatgatgaaaggggtgataaaagctattgaagaa
atggcaacagcagttggtaagcaacaaattgaatggcaagcacctgaaatagatactgtt
ctgcaagaaagagtatctcaaattgctcgcaaagaagttgaagaagcctatttaattaaa
gacaaacaacaacgttaccaacgcttagatgagctaagagaacaaacggttgctgcacta
actgcagaaaatgatgaactaaaagcagaagtcattgcgggtatgtttggttctttggaa
agctccattgttaggaatcgtattttagatggcgaaccacgaattgatggccgtgatcat
aaaacagtacgaccaattgctgtccgtacaaaatgtcttgaaagaacccacggatcttgt
ttgtttaccagaggcgaaacccaagcgatcgttgtagcaacactaggtaatgagcgtgat
gcacagatgcttgatggcatttctggcgaaagtaaagatcgctttatgctgcattacaat
ttcccaccctattccgttggtgaaactggtcaggtaggcagtcctaagcgacgtgaaatt
ggtcatggacgtttggcaaaacgcgctttattagctgttcttcctgaagccagtgaattt
ccatatgtgctgagagttgtttctgaaattacggaatctaatggttcaagctccatggca
acagtttgcggaactagtttagccttaatggatgctggtgtcccattaaaagctcctgtt
gctggtgttgcaatgggcctgatcaaggaaggggagcgatttgctgtattaacagatatc
ttaggtgatgaagatcatttaggcgatatggatttcaaagtggctggaactgaaaatgga
atcactgccttgcaaatggacatcaaaatttcaggaattacgaatgagattatggaacaa
gctttagatcaagctttagcaggtcgcatgcatattcttggagtaatgaacaatgccttg
gcagaacctcgagctgaattatctgagcatgcaccaagaattacaacaatgaaagtagct
gaagacaaaatccgtactatcattggtaaaggtggggctactattaaagggttaattgat
agcactggtgtagcaatagacattgatgattcaggggtggtccaattattctctccagat
aaaatggcattagaagaagcacaaagacagattaaacttcttgttgctgaaattgaagta
ggacaaacttatcagggtaaagtaagtaaaatagtggactttggagcctttatcaattta
ttaccaggtaaagatggtttattgcatatttcgcaaatttgcagtgatagatcacaaaaa
gtagaaagcattctacaagaaggacaagatatagaagtcttcgttgctggcatcgataaa
caaggccgagtgaagttggagtggaaagataaaccacaaggaactgatccacaatcagaa
caaaatcaggttgaaatggtcgaggaatctgctactgccatcgattcagaagagcttgct
gtcgctcatcctaagtcttcagaagaagagtaa
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