Listeria welshimeri: lwe1968
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Entry
lwe1968 CDS
T00422
Name
(GenBank) ATP-dependent DNA helicase RecQ, putative
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lwe
Listeria welshimeri
Pathway
lwe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lwe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lwe1968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lwe03019
]
lwe1968
03400 DNA repair and recombination proteins [BR:
lwe03400
]
lwe1968
Enzymes [BR:
lwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
lwe1968
Messenger RNA biogenesis [BR:
lwe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
lwe1968
DNA repair and recombination proteins [BR:
lwe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
lwe1968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAK21386
UniProt:
A0AK54
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All DBs
Position
complement(1996406..1997812)
Genome browser
AA seq
468 aa
AA seq
DB search
MNLEQELKAYLGFEEFRPGQKEVIEAALRKKNCFAMLPTGTGKTVCYQLAGHLMEGLVLI
VSPLLSLMQDQMERMRAQGEKRVAALNSFLKREEKSQILANIHFYKFLFLSPEMLNNETV
KTLLLKQKISLFVVDEAHCISQWGHDFRPDYLMLGQFIEEAKFPVSMVLTATATKQVRAD
ILTQLHLTNCEQVIYSVNRPNISLQVEKFSNQHLKKERLYELVSKLQTPGIIYFSSKKLA
EQTAHELNGMEGLKVAYYHGDMEPEDRIVIQQQFVYGQLDIICATSAFGMGIDKANIRFV
IHYHMPADLEAYLQEIGRAGRDGVASVAILLYASGDEFIQMQLADQDIPDVSLIHLSKDQ
LKTLPETEQRFIDYYQRSGLSSAELTAKIDYRKKWKRRNLQQFIGYLHTEDCRRYYIMHY
FEETPDNQNKPVNCCDLDGAGISSYEKQERVESKELPSWETYLSYLLQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagagcaagaactaaaagcttatcttggttttgaagaatttcgccctggtcaa
aaagaagtaattgaagcagctctaagaaagaaaaattgttttgctatgttacccactggt
acaggaaaaacagtctgttatcaattagccggtcacttgatggaaggactagtattaatt
gtgtcaccgctactttctttaatgcaagaccaaatggaacgaatgcgagcacaaggagag
aagcgagtcgctgccttaaatagctttttaaaaagggaagaaaaaagccaaatccttgct
aatattcatttttataaattcctatttttatcaccagaaatgttaaataatgaaacagta
aaaacgctgttactaaaacaaaaaatcagtttgtttgttgtggacgaggcgcattgtatt
tctcagtgggggcatgactttcgaccagattatttaatgttaggtcagtttattgaagaa
gctaaatttcctgtgtcaatggttttgactgcaacagctactaaacaagtaagagctgat
attttaacacagcttcatttaactaattgtgaacaagtcatttattcggttaaccggcca
aatatttccttgcaagtagaaaaattcagcaatcagcatttaaaaaaagaacgactttat
gaattggtttcaaaattacaaacgccgggtattatctatttttcaagcaaaaaattagca
gaacagacagctcatgagttaaacggaatggaaggcttaaaagttgcttattatcatggg
gatatggaaccagaagataggattgtgattcaacagcaatttgtctatggtcaattagat
attatatgtgctactagtgcttttggaatgggaattgataaggcgaatattagatttgtt
attcattatcatatgcctgctgatttagaagcttatttacaagaaattggacgcgctggt
cgtgacggggttgctagtgtcgctattttgctttatgcaagtggagatgaatttatccaa
atgcagttagcagaccaagatattccagatgtcagcttaattcatttatccaaagatcaa
cttaagactttaccagaaacggagcaacgttttatcgattattatcagaggagtgggctt
agttctgcggaattaactgccaaaatagactaccgtaagaaatggaagcgaagaaatctt
cagcaattcataggttacttacatacagaagattgccggcgttattatattatgcactat
tttgaggaaaccccggataatcaaaacaaacctgttaattgttgtgatttagatggtgca
gggatctctagttatgaaaaacaagaacgcgtagaatcaaaagaacttcctagctgggaa
acgtatttaagttatttattacaataa
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