Leptonychotes weddellii (Weddell seal): 102730904
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Entry
102730904 CDS
T08708
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X4
KO
K06238
collagen type VI alpha
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04151
PI3K-Akt signaling pathway
lww04510
Focal adhesion
lww04512
ECM-receptor interaction
lww04518
Integrin signaling
lww04820
Cytoskeleton in muscle cells
lww04974
Protein digestion and absorption
lww05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102730904 (COL6A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102730904 (COL6A3)
04518 Integrin signaling
102730904 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102730904 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102730904 (COL6A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102730904 (COL6A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102730904 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lww04147
]
102730904 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
lww00536
]
102730904 (COL6A3)
Exosome [BR:
lww04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102730904 (COL6A3)
Glycosaminoglycan binding proteins [BR:
lww00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102730904 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
102730904 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
fn3
HC2
Motif
Other DBs
NCBI-GeneID:
102730904
NCBI-ProteinID:
XP_006746485
UniProt:
A0A2U3YRY2
LinkDB
All DBs
Position
Unknown
AA seq
3114 aa
AA seq
DB search
MRKHRHLPLVAVFCLFLSGFSLTHAQQQQADVKNGAAADIIFLVDSSWSIGKEHFQLVRE
FLYDVIESLAVGDSDFRFALVQFNGNPHTEFLLNTYRTKQEVLSHISNMSYIGGSNETGK
GLEYVMQNHLTEAAGSRASDGVPQVIVVLTDGHSDDGLALPSAELKSADVNVFAIGVEDA
DEGALKEIASEPLNMHVFNLENFTSLHDIVGNLVSCVQSSVAPEGAGGTDTLKDITAQDS
ADIIFLIDGSNNTGSVHFAVIRDFLVNLLERLSVGAQQIRVGVVQYSDEPRTVFSLDTYS
TKAQVLDAVKALAFTGGELANVGLALDFVVENHFTRAGGSRVEEGVPQVLVLISAGPSSD
EIRDGVIALKQASVFSFGLGAQAASRAELQHIATNDNLVFTVPEFRSFGDLQEQLLPYIV
GVAQRHIVLQPPTIVTEVIEVNKRDIVFLVDGSSALGLANFNAIRDFIAKVIQRLEIGQD
LIQVAVAQYADTVRPEFYFNSYPSKREVITAVRRMKPMEGSVLYTGSALDFVRNNLFTSS
AGYRAAEGVPKLLVLITGGKSLDEISQPAQELKRSSIMSFAIGSKATDQAELEEIAFDSS
LVFIPTEFRAAPLQGVLPGLLAPLRTLSGTSEVHVNKRDIIFLLDGSFNVGKTNFPYVRD
FVMNVVNSLDVGSDNIRVGLVQFSDTPVTEFSLNTYQTKSELLAHLRQLQLTGGSGLNTG
AALGYVHAKHFAEAGGSRIRDHVPQLLLLLTAGRSDDAYLPAANALARAGVLTFCVGAGQ
ASKAELEQIAFNPSLVYLMDEFSSLPALPQQLIQPLTTYVSGGVEEVPLAQPESKRDILF
LFDGSANLVGQFPAVRDFLYKVIDELDVKAEGTRIAVAQYSDDVRVESRFDEHQNKPEIL
SLVKRMKIKTGKALNLGYALDYAQRYIFVKSAGSRIEDGVLQFLVLLVAGKSSDRLDTPA
LNLKQSGVVTFVLQAKNADPAELELMVPSPVFILATASLPKIGELQPQIVSLLKSVQNGA
PTPVSGEKDVVFLIDGSEGVRSGFPLLKEFVQRVVESLDVGPDRVRVALVQYSDRNRPEF
YLNSYMDQQSVVNAVRRLTLLGGPTPNTGAALDFVLRNILISSAGSRITEGVPQLLIVLT
ADRSGDDVRGPSVVLKRGGAVPIGIGIGNADITEMQTISFIPDFAVAIPTFQQLGTIQQV
ISDRVIQLSREELSRLQPVLLLPTSPGVGSKKDVVFLIDGSQSAGPEFQYIRTLIERLVD
YLDVGFDTTRVAVIQFSDDPRVEFLLNAHSSKDEVQNAVRRLRPKGGRQINIGGALEYVS
RNIFKRPLGSRIEEGVPQFLVLISSGKSDDVVDDSAAELKQSGVAPFTIARNADQEELVK
ISLSPEYVFSVSTFRELPSLEQKLLTPITTLTSEQIQKILASTRYPSPAIESDAADIVFL
IDTSDSIKPDDVAHIRDFVIKIVRRLNIGPNKVRIGVVQFSNEVFPEFFLKTHKSQAAVL
DALRRLRFRGGSPLNTGKALEFVARNLFVKSAGSRIEDGVPQHLVLFLGGKSQDDISRFS
QVISSSGIVSLGVGDRNIDRTELQTITNDPRLIFTVREFRELPSIEDRVMHAFRPSGVTP
APPGVDIPSPSRPEKKKADVVFLLDGSINFRRDSFQEVLRFVSEIVDTLYEGGDSIQVGL
VQYNSDPTDEFFLKDFSTKEQIIDAINKVVYKGGRHANTKVGIEHLRQNHFVPEAGSRLD
QRVPQIAFVITGGKSVEDAQEASLALTQKGVKVFAVGVKNIDSEEVGKIASNSATAFRVG
NVQELSELSEQVLETLHDAMHETLCPGVTDISKACNLDVILGFDGSRDQNVFVTQKGLES
KVDAVLNRISQMQRISCSGDRMPTVRVSVVASTPSGPVEAFDFAEYQPELFEKFRNMRSQ
QPYVLTADALKVYQNKFRQSSPDSVKVVIHFTDGVDGSLADLQKASEELRQEGVQALILV
GLERVANLEQLMQLEFGRGFLYNRPLRLNLLDLDYELAEQLDNIAEKACCGVPCKCSGQR
GDRGPLGSIGPKGIPGEDGYRGYPGDEGGPGERGPPGVNGTQGFQGCPGQRGVKGSRGFP
GEKGELGEIGLDGLDGEDGDKGLPGSSGEKGNPGRRGDKGPKGDKGERGDIGIRGDPGNS
GQDSQQRGPKGETGDIGPMGLPGRDGVSGSPGEIGKDGGFGRRGPVGAKGNKGGPGQPGS
VGEQGTRGAQGPPGPTGPPGLIGEQGISGPRGSGGTAGVPGERGRTGPLGRKGEPGEPGP
KGGIGSRGPRGETGDDGRDGVGSEGRRGKKGERGFPGYPGSKGAPGEPGTGGALGPKGIR
GRRGNSGPPGAVGQKGDPGYPGPSGPRGNRGDSMDQCALVQSIKDKCPCCYGPLECPVFP
TELAFALDTSEGVTQDIFSRMRDVLLKIVDNLTIAESNCPRGARVAVVTYNNEVTTEIRF
ADSKKKSLLLDKIKNLQVALTSKQQNLETAMSFVARNTFKRVRNGFLMRKVAVFFSNKPT
RASPQLREAVLKLSDAGITPLFLTSQEDRQLINALQINNTAVGHVLVLPARRDLTDFLKN
ILMCHVCLDICNIDPSCGFGTWRPAFRDRRAAGSDVDIDMAFILDSSESTTLFQFNEMRK
YIGYLVRQLDLSPDPKASQHFTRVAVVQHAPYESVGNTSVPPVKVEFSLTDYGSKEKLVD
FLNSRMTQLQGTRDLGSAIEYTIENVFESAPSPRDLKIMVLMLTGEVEKEQLEEAQRVIL
QAKCKGYFFVILGIGRKVNVREVYSFASEPNDVFFKLLDKSTELNEEPLMRFGRLLPSFV
SSENAFYLSPDIRKQCDWSQGDQLSIKNPVKFGHKHLNIPNNVTSSPTSKLVTTTEPVTT
TTKPVTTTTKPVTVVNLSASKPAAAKPAPPKPAASRPVATRPLAAKPEATKTATVRPAVA
VKPVATKPVAAKPAAVRPPTAARPVAAKAEAPKLQAAKPATTKPATAKPAVKAFREVQVS
DITENSAKLHWERPEPPSPYFYDLTITSAHDQSLVLRQNLSVTERTVGGLLAGHTYHVAV
VCYLKSQVRAAYQGSFSTSEYTVSPEQSVPEFHAQPQTGHKGNDPDSLNLKQQS
NT seq
9345 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacatcggcatttgcccttggtggccgtgttttgtctctttctctcaggcttt
tctcttacccatgcccaacagcagcaagcagatgtcaaaaatggtgctgctgccgatata
atatttctagtggattcctcttggagcattggaaaggaacatttccaacttgttcgagag
tttctgtatgatgttatagaatctttagctgtgggagacagtgatttccgttttgctctg
gtccagttcaacggcaacccacataccgagttcctgttaaatacgtaccgtactaagcaa
gaagtcctctcccacatttccaacatgtcctatattgggggaagcaatgagactggaaaa
ggattagaatacgtaatgcagaaccacctcactgaggctgctggaagccgggccagtgac
ggagtccctcaggttatcgtagtgttaaccgatggacactcggacgacggccttgctctg
ccctcagcggaacttaagtctgctgatgttaacgtgtttgcaattggagttgaggatgca
gatgaaggagcattaaaagaaatagcaagtgaaccgctcaatatgcatgttttcaaccta
gagaattttacctcacttcatgacatagtaggaaacttagtgtcctgtgtgcagtcatcc
gtggctccagaaggggctggaggcacagacacccttaaagacatcacagcacaagactct
gctgacattattttcctaattgacggatcaaacaacaccggaagtgtccattttgcagtc
attcgcgacttccttgtaaatctccttgagagactctcagtcggagctcagcagatccga
gtgggggtggtccagtatagcgatgagcccagaaccgtgttctccttggacacctactcc
accaaggcccaggttctggatgcagtgaaagcccttgcgttcactggtggggagctggcc
aatgtcggccttgcccttgatttcgtggtggagaaccacttcacccgggcagggggcagc
cgagtggaggaaggggttccccaggtgctggtcctcataagtgctgggccttctagtgac
gagatccgcgatggggtgatagcactgaagcaggctagcgtattctcatttggcctcgga
gcccaggccgcctccagggccgagcttcagcacatagctaccaatgacaacttggtgttt
actgtcccggaattccgtagctttggggacctccaggagcaattactgccgtacattgtt
ggcgtggcccaaaggcacattgtcttacaaccgccaaccattgtcacagaagtcattgaa
gtcaacaagagagacatagttttcctggtggatggctcatctgcactgggactggccaac
ttcaatgcaatccgcgacttcattgccaaagtcatccagaggctggaaatcggacaggat
cttatccaagtggcagtggctcagtatgcagacactgtgaggccagagttttatttcaat
agctaccccagtaaaagggaagtcattaccgccgtgcggagaatgaaacccatggaaggc
tcagtcctgtacacgggctccgctctggactttgttcggaacaacctgttcactagttcg
gctggctaccgggccgccgagggggtccctaagcttctggtgctgattacaggtggtaag
tccctagatgaaatcagccagcctgcccaggagctgaagagaagcagcatcatgtccttt
gccattgggagcaaggctaccgaccaggctgagctggaagagattgcttttgattcctcc
ctggtgttcatccccactgagttccgagccgcccctttgcagggcgtgctgcccggcttg
ctggcgcctctcaggaccctctccggaacctctgaagttcacgtaaacaaaagggatatc
atctttcttttggatggatcgttcaacgttggaaagaccaatttcccttacgtgcgggac
tttgtcatgaacgtagttaacagccttgatgtcggaagcgacaatatccgtgtcggttta
gtgcaatttagtgacactccagtaacagagttctccctaaacacataccagacaaagtca
gagttgctggcccacctgaggcagctgcagctcacgggggggtcgggcctgaacacgggc
gcggccctgggctacgtccatgccaagcacttcgccgaagctggcggcagcaggatccgc
gaccacgtgccgcagctcttgctgctgctcacagccgggcggtctgacgacgcctacctg
ccggccgccaacgccctagcacgcgcaggcgtcctcaccttctgcgtgggcgctggccag
gcgagtaaggcagagcttgagcagattgcttttaacccgagcctggtgtatctcatggat
gagttcagctccctgccagctttgcctcagcagctgattcagcccctaaccacttatgtt
agtggaggtgtggaggaagtgcccctcgcccagccagaaagcaagcgagacattctattc
ctctttgatggctcagccaatcttgtgggccagttccctgctgtccgcgactttctctac
aaggttattgatgagcttgatgtgaaagcggagggaacccggattgcggtggctcagtac
agcgatgatgtcagggtggagtcccgttttgatgagcaccagaataagcccgaaatcctg
agtcttgtgaagagaatgaagatcaagaccggcaaagcccttaatctgggctatgccctg
gactacgcacagaggtacatttttgtgaagtctgctggaagccggatcgaggatggagtg
cttcagttcctggtgctgctggttgcaggaaagtcatcggatcgtttggacacacctgca
ctcaacctgaaacagagcggggtggtgactttcgtattgcaggccaagaacgcagatcct
gctgagctggagttgatggtgccgtcccccgtcttcatcctggccaccgcgtcacttccc
aagattggagaacttcagccacagatcgtcagtctcttaaaatcagtgcaaaatggggca
ccgacaccagtttcaggtgaaaaggatgtggtgtttctgattgatggctctgagggcgtc
aggagcggcttccctctgctgaaagaatttgtccagagagtggtggagagcctggatgtg
ggcccggaccgggttcgtgtggctcttgtgcagtacagcgaccggaacagacccgagttc
tacctgaattcctacatggaccagcagagtgtggtcaacgccgtacgcaggctgacccta
ctgggagggccaacccccaacactggggctgccctggactttgtcctgaggaatattctg
atcagctctgccggaagcaggataacagaaggtgtaccccagctgctgatcgtcctgaca
gcggacaggtctggggatgacgtgaggggcccctcagtggtcctgaagaggggaggggca
gtgcccattggcatcggcattgggaatgctgacatcacggagatgcagaccatctccttc
atccccgactttgccgtggccattcccaccttccagcagctggggaccatccagcaggtg
atctccgacagagtcatccagctcagccgggaagagctaagcaggttgcagccagttttg
ctcctcccaacgagcccaggtgttggaagcaagaaggatgtggtctttctcattgatggg
tcccaaagtgctggtcctgaatttcagtacatccgcaccctcattgagaggctggttgac
tacctggacgtgggcttcgacacgactcgggtggcagtcatccagttcagcgacgatccc
agggtggaattcctgctgaatgcccattccagtaaggatgaagtgcagaatgcagtgagg
cggctgaggcccaaaggtgggaggcagatcaacattggtggtgccctggagtacgtgtca
aggaatatcttcaagaggccactggggagccggattgaagagggggtccctcagttcctg
gtcctcatttcatctgggaagtctgatgatgtggtagacgattctgcagccgagctcaag
cagtctggtgtggcaccatttaccattgcaaggaatgcagaccaggaagagttggttaag
atctctctgagccctgaatatgtgttctcagtgagcacattccgggagctgcccagcctg
gagcagaaactactgacccccatcacaaccctaacttcagagcagatacagaagatcctg
gccagcactcgctatccttctccagctattgagagtgatgctgcagacattgtcttccta
attgatacctctgacagcatcaagcctgatgacgttgcacatattcgggactttgttatc
aagatcgtccgcagactcaacattggccccaataaagtgaggattggggttgtacagttc
agcaatgaggtcttcccagaattcttcctgaagacccataaatcccaggctgctgtgctc
gatgccttacgtcgcctgaggttcagaggggggtccccactgaacactggcaaagctctg
gaatttgtggcaagaaacctctttgtcaagtctgctgggagccggatagaagacggggtg
ccccaacacctggttctctttctgggtggaaaatcacaggatgatatttccaggttttcg
caggtgattagctcctcagggattgtgagtttaggagtgggagaccgaaatatagacaga
acagagctacagaccatcaccaacgaccccaggctgatattcacggtgcgagagttcaga
gagctccccagcatagaagacagggtcatgcatgcctttcgaccctccggggtcacacct
gcacctccaggagtggacataccttctccctcacggccagagaaaaagaaagcagatgtt
gtgttcctgttggatggctccatcaatttcaggagggacagtttccaggaagtgctccgt
ttcgtgtctgaaattgtggacacgctgtatgaggggggtgactccatccaggtggggctg
gtccagtacaactctgaccccactgatgagttcttcctgaaggacttttccaccaaggag
cagattattgacgccatcaacaaagtggtctacaaaggggggagacatgcaaacaccaag
gtgggcatcgagcacctgcggcagaatcacttcgtgccagaggcaggcagccgcctggat
cagagggtccctcagatagcatttgtgatcacgggtggaaagtcagtggaggatgcccag
gaggccagcctggcactcacccagaagggtgtcaaagtgtttgccgtcggcgtgaaaaac
atcgactcagaggaggttgggaaaatagcgtccaacagtgctacagcgttccgagtgggg
aatgttcaggagctgtctgaattgagcgagcaagttctggaaactctgcatgatgcaatg
catgagaccttatgtccgggtgtgactgatatttccaaagcctgtaatctggatgtgatt
ctggggtttgacggatcaagagaccagaatgtatttgtgacccagaagggccttgagtcc
aaggtggacgccgttttgaatagaatcagccagatgcaaagaatcagctgcagcggggac
cggatgcccaccgtgcgagtgtcggtggtggccagcacgccctcaggtcctgtggaggcc
tttgactttgccgagtaccagccggagctgtttgagaagttccggaacatgcgtagccag
cagccctatgtcctcactgcggacgcactgaaggtctatcagaacaagttcagacagtcc
tcaccagacagtgtaaaggtggtcattcattttacggatggagtggatggaagtctggct
gatttacaaaaggcgtctgaggaactccgacaagaaggggtccaggctctgatcctggtg
ggcctggagcgcgtagccaacttggagcaactgatgcagctggagttcgggcgaggcttc
ctgtacaacaggccgctgaggctcaacttgctggacctcgattatgagctagcagagcag
ctcgacaacattgccgagaaagcttgctgcggagttccctgcaaatgctccggacaaagg
ggagaccgtgggccccttggcagcattgggccaaagggtattcccggggaagatggctat
cgaggttatcccggtgacgagggtggacccggtgagcgcggtcctcctggcgtgaacggc
actcaaggtttccagggctgccccgggcagagaggagtaaagggctctcgcggattccca
ggagagaagggtgaattaggagaaatcgggctagatggtctcgacggtgaagatggagac
aaaggattgcctggttcttctggagaaaaagggaatcccggtagaaggggtgacaaagga
cctaaaggggacaaaggagagagaggggacattggaattcgaggtgacccgggtaactca
ggacaggacagtcagcagagaggacccaaaggagaaactggagacatcggccccatgggt
ctccctgggagagatggggtatctggaagccctggagaaatcgggaaagacggtggcttc
ggccgaaggggacccgtgggagctaagggcaacaagggcggccccggccagccgggctcc
gtgggagagcaggggacccgaggcgcacagggcccacctggtcccaccggtcctccaggc
ctgatcggtgaacaaggcatttctgggcctcggggaagcggagggactgcaggtgttcct
ggagaacgtggcaggaccggtcccctgggaagaaagggtgagcccggagagccaggacca
aagggaggcatcgggagccggggcccccgaggggagacgggtgatgatggcagagacggg
gttggcagtgaaggacgcagaggcaaaaaaggagaaagaggattccctggatacccaggt
tcaaagggtgcccctggtgagccggggacaggcggagcactgggacccaaaggcatcaga
ggccgaaggggaaattcaggacctccaggggcagttgggcagaagggagaccctgggtac
ccaggaccatctggtcccagaggcaacagaggggactccatggatcaatgtgcacttgtc
cagagcatcaaagataaatgtccttgctgctatggacccctggaatgccctgtcttccca
acggagctggcctttgctttagacacctcggagggggtcacccaagacatatttagccgg
atgagggacgtgctcctgaagattgtggacaacctgaccattgctgagagcaactgccca
cgtggggcgcgcgtggccgtggtcacctacaacaacgaggtgaccacggagatccggttt
gccgactccaagaagaagtcgctcctcctggacaagatcaagaacctccaggtggctctg
acatccaagcaacagaatctggaaacggccatgtccttcgtggccagaaacacgtttaag
cgtgtgaggaacggattcctgatgaggaaagtggctgttttcttcagcaataagcccacg
agggcgtccccgcagctcagggaggctgtgctgaagctttcggatgcagggatcacaccc
ttgttcctcacgagccaggaggaccggcagctcatcaacgccttgcagatcaataacaca
gcggtggggcatgtgctcgtcctgcccgctaggagggacctcacggacttcttgaagaac
atcctgatgtgtcacgtttgcctggacatctgcaacattgacccatcctgtggatttggc
acctggaggcctgccttcagggacaggcgagcggcgggcagcgatgtggacatcgacatg
gctttcatcttagatagctctgagtccaccactctgttccagttcaacgagatgaggaag
tacatagggtacctggtcagacagctggacctgagcccagaccccaaagcctcccagcac
tttaccagggtggccgttgtgcagcatgcgccctacgagtccgtagggaacaccagcgtg
ccgcccgtgaaggtggaattctccctgactgactatggctccaaggaaaagctggtggac
tttctcaacagcagaatgacacagctgcaggggaccagggacctgggcagcgccattgaa
tacaccatagagaatgtctttgaaagtgcccccagcccacgggacctgaaaatcatggtt
ctgatgctgacaggtgaggtggaaaaggaacagctggaagaggcccagagagtcattttg
caggccaaatgcaagggttacttcttcgtgattctgggcattggcaggaaggtgaacgtc
agggaggtgtacagcttcgccagtgagccgaacgacgtcttcttcaaactattggataag
tcgactgagctcaacgaggagcctctgatgcgctttgggaggttgttaccatccttcgtg
agcagtgaaaatgctttttacttgtccccagatatcaggaaacagtgtgattggtcccaa
ggggaccaactgtcaattaagaatcccgtgaagtttggtcacaaacatttaaatatccca
aataatgttacttcaagtcctacatccaaactagtgaccaccacagaaccagtgaccacc
acgaccaaaccggtgaccaccacgaccaaaccggtgactgtggtaaatctgtcagcctca
aagccggctgcagcaaagccagccccgcccaaaccggccgcttcgagacccgtggccacg
aggcccttggccgccaagcctgaggccaccaagacggccacggtcagacctgcagtggcc
gtgaagccggtggccacgaagccggtggccgcgaagccagccgctgtaagaccccccact
gcagctagaccagtggccgccaaggccgaggcccccaagctccaggcagccaaaccggcc
accaccaagccggccactgctaagccggcagtgaaggcattccgagaggtccaggtgtcc
gacatcaccgagaacagcgccaaactccactgggagaggcccgagccccccagcccttac
ttttatgacctcaccatcacctcggcccacgaccagtccctggtgctgcggcagaacctg
tcggtgacggagcgcaccgtcgggggcctgctcgccgggcacacataccacgtggccgtg
gtctgctacttgaagtcacaggtcagagccgcctaccaaggaagtttcagcacaagtgag
tacacggtcagccccgaacagtcggtccccgagttccacgcacaacctcaaacaggccat
aaagggaacgatcccgattcattgaatctgaaacaacaaagttag
DBGET
integrated database retrieval system
