Lentzea xerophila: ACRSBM_31415
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Entry
ACRSBM_31415 CDS
T11210
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lxr Lentzea xerophila
Pathway
lxr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lxr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACRSBM_31415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lxr03019
]
ACRSBM_31415
03400 DNA repair and recombination proteins [BR:
lxr03400
]
ACRSBM_31415
Enzymes [BR:
lxr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACRSBM_31415
Messenger RNA biogenesis [BR:
lxr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACRSBM_31415
DNA repair and recombination proteins [BR:
lxr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACRSBM_31415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
AAA_22
HEM4
PglZ_C
Motif
Other DBs
NCBI-ProteinID:
XWW40971
LinkDB
All DBs
Position
6609526..6611610
Genome browser
AA seq
694 aa
AA seq
DB search
MDDIALRELAEERLRALAGPQAVLREDQWTAIHTLVAQRRRALVVQRTGWGKSAVYFIAT
ALLRQLGEGPTVIVSPLLALMRNQIDAAARAGVHAVTINSANPGEWDAVQQQVAAGEVDV
LLVSPERLNNPDFRDSVLPSLTASAGMLVVDEAHCISDWGHDFRPDYRRLRTLLTELPPG
VPVLATTATANNRVVHDVTEQLGLGADEGTLVLRGPLDRDSLRLSVALLPTAESRLGWLA
EQLDRMPGSGIIYTLTVAAADDIAAFLASRGFAVAAYSGKTEPAERERAEEDLLGNRVKA
LVATSALGMGFDKPDLGFVVHVGAPSSPIAYYQQIGRAGRGVERAEVVLLPGHEDRDIWA
YFTSLAFPPEVVVRQVLSALDGAGRPLSTAALEPMVELSRGRLEVVLKVLDVDGAVRRVK
GGWESTGRPWEYDGERYARIAEARKAEQQVMVDYLRTGSCRMKFLQDQLDDPTSHECGRC
DNCTGERLSVEVSEVAAEAARERLLRPGLDVAPRKMWPTGMGAIGVPLSGKIPAAEVAAT
GRALGRLTDIGWGNRLRDLLADGSDREIPDDVFAACVKVLSAWGWDERPVGVVTVGSRRR
PQLVGSFGQKIASIGRLPLLGTVWLGESTHRANSAQRLAGLVRSGETPDLSGVDGPVLLV
DDHIDTGWTMTVAARMLRKEGVSAVLPFALAVTN
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggacgacatcgcactgcgagaactggcggaggaacggctccgggcactggcgggcccg
caggccgtgctgcgcgaggaccagtggaccgcgatccacacgctcgtggcccagcgccgc
agagctctcgtcgtccagcgcacgggctggggcaagtcggccgtgtacttcatcgcgacg
gcgttgctgcgtcagctcggtgagggccccacggtcatcgtgtcgccattgctcgcgctg
atgcgcaaccagatcgacgccgcggcgcgggcgggtgtacacgcggtgacgatcaactcg
gcgaaccccggcgagtgggacgccgtgcagcagcaggtcgcagccggcgaggtcgacgtg
ctcctggtgagtccggaacggctgaacaaccctgatttccgcgactcggtgctcccgtcg
ctgacggcgtcggcgggcatgctcgtcgtcgacgaggcgcactgcatctcggactgggga
cacgacttccggccggactaccgcaggctgcggacgttgctgacggagctgccaccgggc
gtgccggtgctggcgacgacggccacggccaataacagggtggtccacgacgtcaccgag
cagctcgggctcggcgccgacgagggcaccctggtgctgcgcggcccgctggaccgcgac
agcctgcgcctgtcggtcgccctgctgcccacggccgagtcccgcctcgggtggctcgcg
gaacagctcgaccgcatgcccggctccgggatcatctacaccctcacggtcgcggcggcg
gacgacatcgcggcgttcctcgcctcgcgtggcttcgcggtggcggcctactcaggcaag
accgagcccgccgaacgcgaacgcgccgaggaggacctcctcggcaacagggtcaaggca
ctcgtcgccacctccgccctcggcatggggttcgacaagccggatctgggcttcgtggtg
cacgtgggcgccccgtcgtccccgatcgcgtactaccagcagatcggccgggcaggccgt
ggtgtcgaacgggccgaggtggtcctgctgccaggccacgaggatcgcgacatctgggcg
tacttcacgtcgctggcgttcccgcccgaggtggtggtgcgccaggtgctgtccgcgctc
gacggtgcgggcaggccgctctcgacggcggcgctggagccgatggtcgagctgtcgcgc
ggcaggctggaggtggtgctgaaggtgctggacgtcgacggcgcggtccggcgcgtgaag
ggcggctgggagtcgacgggccggccgtgggagtacgacggcgagcggtacgcgcgcatc
gcggaagcgcgcaaggccgaacagcaggtgatggtcgactatctccgcaccggttcgtgc
cggatgaagtttctgcaggaccagctcgacgacccgacttcgcacgagtgcggccgctgc
gacaactgcacgggcgaacgcctgtcggtcgaggtgtccgaggtggcggcggaagcggcc
cgcgaacggctgctgcgccccggcctggacgtggcgccgcgcaagatgtggccgacgggc
atgggcgcgatcggcgtcccgctgtccggcaagatccccgcggccgaggtggcggcgacg
ggcagggcgctcggcaggctgaccgacatcgggtggggcaaccgcctgcgcgacctgctc
gccgacgggagcgaccgcgagatcccggacgacgtcttcgcggcctgcgtgaaggtgctc
tcggcctggggctgggacgaacgccctgtcggcgtggtgacggtcgggtcgcgcaggcgc
ccgcagctggtcggcagcttcggccagaagatcgcatccatcggccggctgccgctcctg
ggcacggtctggctcggggagtcgacgcaccgggccaacagcgcgcagcggctggccggg
ctggtgcggtcgggcgagactccggacctgtccggtgtggacggtccggttctgctggtg
gacgaccacatcgacaccgggtggacgatgacggtggcagctcggatgctcaggaaggag
ggggtgtccgcggtactgccgttcgcgctggcggtgacgaactga
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integrated database retrieval system
