Lentzea xerophila: ACRSBM_43260
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Entry
ACRSBM_43260 CDS
T11210
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lxr Lentzea xerophila
Pathway
lxr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lxr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACRSBM_43260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lxr03021
]
ACRSBM_43260
03400 DNA repair and recombination proteins [BR:
lxr03400
]
ACRSBM_43260
Enzymes [BR:
lxr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACRSBM_43260
Transcription machinery [BR:
lxr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACRSBM_43260
DNA repair and recombination proteins [BR:
lxr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACRSBM_43260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
TrbE
Motif
Other DBs
NCBI-ProteinID:
XWW43161
LinkDB
All DBs
Position
8956130..8959615
Genome browser
AA seq
1161 aa
AA seq
DB search
MAISRATKATAATNSTSGIPGAPKRVSFAKINEPLSTPNLLDLQIQSFEWLTGDEAWFQR
RVDAGDETPTGGLEEVLNEISPIEDFSGSMSLSFTDPRFDEVKASTEECKDKDMTYAAPL
FVTAEFTNHTTGEIKSQTVFMGDFPMMTNKGTFIINGTERVVVSQLVRSPGVYYDTAVDK
TTDKDVFSVKIIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWSTEQIRERFA
FSETLLTTLEKDHTAGTDEALLDIYRKLRPGEPPTKESAQALLENLFFKDKRYDLAKVGR
YKVNKKLGLDTEINTGVLTEDDIVTTIEYLVRLHAGETQMDAANGTDIPVEVDDIDHFGN
RRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGTSQ
LSQFMDQTNPLAGLTHKRRLSALGPGGLSRERAGMEVRDVHPSHYGRMCPIETPEGPNIG
LIGSLSSYARVNPFGFIETPYRKVTDGRVTDQIDYLTADEEDRFVKAQANSPVDDEGNFT
DDRVLVRKKGGEVEFIDPTDVDYMDVSPRQMVSAATAMIPFLEHDDANRALMGANMQRQA
VPLLRSESPLVGTGMELRAAVDAGDVVVAKKTGVVEEVSADYITVMADDGARNTYALHKF
RRSNQGTCINQKPIVNEGDRVSVGQVLADGPCTENGEMALGKNLLVAIMPWEGHNYEDAI
ILSQRLVQDDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSEEVLADLDERGIIRIGAE
VQPGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEYGKVIGIRVFSR
EDDDELPPGVNELVRVYVAQKRKIQDGDKLAGRHGNKGVIGKILPAEDMPFLEDGTPVDI
ILNTHGVPRRMNIGQVLETHLGWIAKQGWSVNGDPDWAKNLPEELYDVDPGTKTATPVFD
GAKEEEITGLLGSTIPNRDGERMVKENGKAQLFDGRSGEPYPFPVSVGYMYILKLLHLVD
DKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSDDVLG
RVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDGDDEDLERA
AANLGINLSRSESPSVDDVVN
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggcgatctctcgcgcgaccaaggccactgctgcgaccaactccacgtcggggatccct
ggagcgccgaagcgggtttcgttcgcgaagattaacgagccgctttcgacgcccaacctg
ctcgacctgcagatccagtcctttgaatggctcaccggcgatgaggcgtggttccagcgc
cgcgtcgacgccggcgacgagaccccgacgggcggcctcgaagaggtcctcaacgagatc
tcgccgatcgaggacttctccggctccatgtcactgtccttcaccgacccacgcttcgac
gaggtcaaggcctcgaccgaggagtgcaaggacaaggacatgacgtacgcggcacctctg
ttcgtcacggcggagttcaccaaccacaccactggcgagatcaagagccagacggtgttc
atgggtgacttcccgatgatgacgaacaagggcacgttcatcatcaacggcaccgagcgc
gtggtggtttctcagctcgtgcgttcgcccggtgtgtactacgacaccgcggtcgacaag
acgaccgacaaggacgtcttcagcgtcaagatcatcccgtcccggggtgcttggctggag
ttcgacgtcgacaagcgcgacaccgtcggtgtccgcatcgaccggaagcgtcgccagccg
gtgacggtgctgttgaaggctctgggctggagcacggagcagattcgcgagcggttcgcg
ttcagcgagacgttgctgaccacgctcgagaaggaccacaccgcgggtaccgacgaggcg
ttgctcgacatctaccgcaagctgcgcccgggcgagccgcccacgaaggagtccgcgcag
gccctgctggagaacctgttcttcaaggacaagcgctacgacctggcgaaggttggccgc
tacaaggtcaacaagaagctgggcctggacaccgagatcaacaccggtgtgctgaccgag
gacgacatcgtcacgacgatcgagtacctcgtccgcctgcacgcgggtgagacgcagatg
gacgccgccaacggcaccgacattcccgtcgaggtcgacgacatcgaccacttcggcaac
cgtcgcctgcgcacggtcggtgagctgatccagaaccagatccgcgtcggtctgtcccgc
atggagcgcgtcgtccgcgagcgcatgaccacgcaggacgtcgaggccatcacgccgcag
accctgatcaacatccgtcccgtcgtggcggcgatcaaggagttcttcggcacctcgcag
ctgtcgcagttcatggaccagaccaacccgctcgcgggcctgacccacaagcgccgcctg
tcggcgctgggtcccggtggtctgtcccgtgagcgggccggcatggaggtccgcgacgtc
cacccgtcgcactacggccgcatgtgcccgatcgagacgccggaaggcccgaacatcggc
ctgatcggttcgctctcgagctacgcgcgggtcaacccgttcggcttcatcgagacgccg
taccgcaaggtcaccgacggccgggtcaccgaccagatcgactacctgaccgcggacgag
gaagaccgcttcgtcaaggcgcaggcgaactcgccggtcgacgacgagggcaacttcacc
gacgaccgcgtcctggtccgcaagaagggcggcgaggtcgagttcatcgacccgaccgac
gtcgactacatggacgtctcgccgcgccagatggtgtcggccgcgaccgccatgatcccg
ttcctcgagcacgacgacgcgaaccgcgccctgatgggtgcgaacatgcagcgtcaggcg
gtcccgctgctccgctccgagtcgccgctcgtcggcaccggcatggagctgcgtgccgcg
gtcgacgccggtgacgtcgtcgtcgcgaagaagacgggtgtcgtcgaggaggtctccgcc
gactacatcaccgtcatggccgacgacggtgcgcgcaacacctacgcgctgcacaagttc
cgtcgctcgaaccagggcacctgcatcaaccagaagcccatcgtcaacgagggcgaccgg
gtgagtgtgggtcaggtcctggccgacgggccgtgcaccgagaacggtgagatggcgctc
ggcaagaacctgctcgtggcgatcatgccgtgggagggccacaactacgaggacgcgatc
atcctgtcgcagcgcctcgtgcaggacgacgttctcacctcgatccacatcgaggagcac
gagatcgacgcccgcgacacgaagctcggcgccgaggagatcacccgggacatcccgaac
gtctccgaggaggtcctggccgacctggacgagcgcggcatcatccgcatcggtgccgag
gtccagcccggcgacatcctcgtcggcaaggtcacgcccaagggcgagaccgagctgacg
ccggaggagcggctgctccgcgcgatcttcggtgagaaggcgcgcgaggtccgcgacacg
tcgctgaaggtgccgcacggtgagtacggcaaggtcatcggcatccgcgtcttctcgcgt
gaggacgacgacgagctgcctccgggcgtgaacgagctcgtccgcgtctacgtggcccag
aagcgcaagatccaggacggtgacaagctcgccggccgccacggcaacaagggcgtcatc
ggcaagatcctccccgcggaggacatgccgttcctcgaggacggcacgccggtcgacatc
atcctgaacacccacggtgtgccgcgtcgtatgaacatcggccaggtgctggagacccac
ctcgggtggatcgccaagcagggctggagcgtcaacggcgacccggactgggcgaagaac
ctgccggaagagctgtacgacgtcgaccccggcaccaagaccgcgacccccgtcttcgac
ggcgccaaggaagaggagatcacgggcctgctcggctcgacgatcccgaaccgcgacggc
gagcggatggtcaaggagaacggcaaggcgcagctcttcgacggtcgctccggcgagccg
tacccgttccccgtgtcggtcggctacatgtacatcctgaagctgctgcacctggtggac
gacaagatccacgcgcgttcgaccggcccgtactcgatgatcacgcagcagccgctgggt
ggtaaggcgcagttcggtggtcagcgcttcggtgagatggagtgctgggcgatgcaggcg
tacggcgccgcatacaccctgcaggaacttctcaccatcaagtccgacgacgtgctcggc
cgcgtgaaggtctacgaggccatcgtcaagggcgagaacatcccggaacccggtatcccg
gagtccttcaaggtgctgctcaaggagctgcagtcgctctgcctcaacgtcgaggtgctg
tcttcggacggtgccgcgatcgagatgcgcgacggcgacgacgaggacctggagcgcgcg
gccgcgaacctcggcatcaacctgtcgaggtccgagtcgccctccgtggacgacgtcgtc
aactag
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integrated database retrieval system
