Lysobacter yananisis: RDV84_14450
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Entry
RDV84_14450 CDS
T09342
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18104
ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:
7.6.2.2
]
Organism
lya
Lysobacter yananisis
Pathway
lya01501
beta-Lactam resistance
lya02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RDV84_14450
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RDV84_14450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lya02000
]
RDV84_14450
01504 Antimicrobial resistance genes [BR:
lya01504
]
RDV84_14450
Enzymes [BR:
lya01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
RDV84_14450
Transporters [BR:
lya02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RDV84_14450
Antimicrobial resistance genes [BR:
lya01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AbcA [MD:
M00700
]
RDV84_14450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
SbcC_Walker_B
AAA_30
AAA_29
AAA_15
AAA_22
PhoR
AAA_25
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WMT01197
LinkDB
All DBs
Position
complement(3455523..3457262)
Genome browser
AA seq
579 aa
AA seq
DB search
MWRLIRRGRPSVAASSVALLAALASVAGSLWFPIQTKHLIDRFDGGGIELQQVLLVAAAL
VGGAAAGALSAYMLARIGYQVVAELRAALVEKLLRLPVASFDKESSGERVSRVIRDCEAI
SELITKQTVNLVTGVLLLAGSVVVLLLLDVPLTLTLLGSVVAAFAVMIPIAFLLDGLSRR
TQDRVARISGILTHIFQEIRLVKAFTAEAQERRRSVAEIEDLKRLGLKTARVNVALEPVM
SLAMTMAIIIILVYGAARVAAGEISVGTLTAFILYIFNVVNPLAQLTNFTAELQKAKGAS
VRIAAIFDEAEEEKKNSAQPAPHSPGGVLEFRNVSFAYAGRDTTVLNGIDLLFEPGTTTA
LVGASGSGKTTILSLIERFYEPSSGQILYDGRPIADYPLQQWRGGIGYVAQSAPVMPGSV
RDNIAYGLSGEFTDAQVRSAAERAGALDFIERMPQGLDTVLIEQGNNLSGGQRQRIAIAR
MFLRDPDLLILDEATSNLDSETEHQVRLALEALMRGRTNIIVAHRLSTVIHAQRICFLEA
GRISGIGNHGELLASHPYYARLVQRQFQQPVEAEPMEAG
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
ttgtggcgactgatccgtcgcgggcggccgtcggttgcggcatcgtccgtcgccctgctc
gccgcgctggcgtcggtcgccggttcgctgtggttcccgatccagaccaagcacctgatc
gaccgcttcgacggcggcggcatcgaactgcagcaggtgctgctggtggccgcggcgctg
gtcggcggcgccgccgcgggcgcgctgtcggcctatatgctcgcgcgcatcggctaccag
gtggtggcggaactgcgcgccgccctggtcgagaagctgctgcgactgccggtcgcgtcc
ttcgacaaggaaagcagcggcgagcgcgtcagccgcgtgatccgcgattgcgaagcgatt
tccgagctgatcaccaagcagaccgtcaacctggtcaccggcgtgctgctgctggccggg
tcggtcgtggtcctgctgttgctggacgtgccgctgaccctcactctgctcggctcggtc
gtcgccgccttcgcggtgatgatcccgatcgcgttcctgctcgacggactctcgcgccgc
acccaggaccgcgtcgcccggatcagcggcatcctcacccacatcttccaggaaatccgc
ctggtcaaggcgttcaccgccgaggcgcaggagcgccggcgcagcgtggcggagatcgaa
gacctcaagcgcctgggactgaagaccgcgcgcgtgaacgtggcgctggaaccggtgatg
agcctggcgatgaccatggcgatcatcatcatcctggtctacggcgccgcgcgcgtcgcg
gccggcgagatcagcgtcggcacgctcaccgccttcatcctgtacatcttcaacgtggtc
aatccgctcgcgcagctgaccaatttcaccgcagaattgcagaaagccaagggcgcctcg
gtgcggatcgcggcgatcttcgacgaagccgaggaagagaaaaaaaacagcgcccaaccc
gcgccgcacagccccggcggcgtgctggagttccgcaacgtctccttcgcctacgccggc
cgcgacaccaccgtgctcaacggcatcgacctgttgttcgagccgggcaccaccaccgcc
ctggtcggtgccagcggcagcggcaagaccacgatcctgtcgctgatcgagcgcttctac
gaacccagttctggccagatcctctacgacggccgcccgatcgccgattacccgctgcag
cagtggcgcggcggcatcggctacgtggcgcagagcgcgccggtcatgcccggcagcgtg
cgcgacaacatcgcctatggcctgtccggcgaattcaccgacgcccaggtgcgctcggcg
gccgagcgcgccggcgcgctcgacttcatcgaacgcatgccgcagggcctggacaccgtg
ctgatcgaacagggcaacaacctgtccggcggccagcgccagcgcatcgccatcgcgcgc
atgttcctgcgcgatccggatctgctgatcctcgacgaggccacctccaacctcgacagc
gagaccgagcaccaggtgcggctggcgctggaagcgctgatgcgcgggcgcaccaacatc
atcgtcgcccaccgcctgtccacggtgatccacgcgcagcgcatctgcttcctcgaagcc
ggccgcatctccggcatcggcaaccacggcgaactgctcgccagccatccctattacgcg
cgcctggtgcagcgccagttccagcaaccggtcgaggccgaaccgatggaggccggctga
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