Lysinibacter sp. HNR: FrondiHNR_11435
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Entry
FrondiHNR_11435 CDS
T09375
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00020
Citrate cycle (TCA cycle)
lyh00190
Oxidative phosphorylation
lyh00650
Butanoate metabolism
lyh00720
Other carbon fixation pathways
lyh01100
Metabolic pathways
lyh01110
Biosynthesis of secondary metabolites
lyh01120
Microbial metabolism in diverse environments
lyh01200
Carbon metabolism
Module
lyh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lyh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lyh_M00149
Succinate dehydrogenase, prokaryotes
lyh_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FrondiHNR_11435 (sdhA)
00650 Butanoate metabolism
FrondiHNR_11435 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
FrondiHNR_11435 (sdhA)
00720 Other carbon fixation pathways
FrondiHNR_11435 (sdhA)
Enzymes [BR:
lyh01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
FrondiHNR_11435 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Thi4
HI0933_like
Pyr_redox_2
DAO
F420_ligase
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
WGD37040
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Position
2506105..2507919
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AA seq
604 aa
AA seq
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MNSTPHVEADDVKIVDGIHYHQYDVVIVGAGGAGMRAAIEAGPKAKTAVITKLYPTRSHT
GAAQGGMAAALANVEEDNWEWHTFDTVKGGDYLVDQDAAEILAKEAIDAVIDLENMGLPF
NRTPEGKIDQRRFGGHTRDHGKAPVRRACYAADRTGHMILQTLFQNCVKLGINFYNEFYV
LDMAMTEVDGVQQPSGVIAYELATGTLHVFQAKSIIYATGGFGKIFKTTSNAHTLTGDGI
GVVWRKGLPLEDMEFYQFHPTGLAGLGILLTEGARGEGAILRNASGERFMERYAPTIKDL
APRDIVARCMVQEVLDGRGAGPNKDYVYLDCTHLGAEVLETKLPDITEFARTYLGVDPVV
EPVPVFPTAHYAMGGIPTNIHAEVLRDNTTVVPGLYAAGECACVSVHGSNRLGTNSLLDI
NVFGKRAGNAAADYANGAEFVPLPEDPAREVRELVESLRSSTGTERLADIRRELQESMDR
GAQVFRTDESLGEVLGVIHDLRQRYKNISVQDKGQRYNTDLLEAIELGFLLDLAEVLVFA
ARNRKESRGGHMRDDYPERDDKNYMKHTMAYLTGDPHSPNPEDHIRLDWKPVVQTRYEPM
ERKY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagcaccccacatgttgaagcagatgacgtaaagatcgtagacggcatccactac
caccaatacgacgttgttatcgttggtgcgggtggtgccggtatgcgcgccgccatagag
gccggccccaaggcaaaaaccgccgtcatcaccaagctctaccccacccgctcacacacc
ggcgcagcccagggagggatggcggccgcacttgccaacgtggaggaggataactgggag
tggcacacctttgacacggtgaagggtggcgactatctggttgaccaggatgcggccgaa
atcctggcaaaagaggccatcgacgcggttattgacctcgaaaatatgggccttcccttt
aacaggactcccgagggcaagattgaccagcgccgttttggcgggcacacccgcgaccac
ggtaaggccccggtgcgccgcgcctgctacgccgccgatcgcaccggacacatgatcctc
caaaccctatttcagaactgtgtgaagctggggatcaacttctacaacgagttctacgtg
ctcgacatggcgatgacggaggttgatggcgttcaacagccctccggtgttatcgcctat
gagttagcaaccggaaccctgcacgtgttccaggcaaagtcaatcatctatgcaaccggc
ggcttcggaaagatctttaagacaacctccaacgcccacactctcaccggtgacggaatc
ggggtggtctggcgcaagggactacccctcgaagacatggagttttatcaattccacccc
accggcctggccgggctgggcatccttctcacggagggagcccgcggtgagggagccatc
ctccgcaacgcgtccggtgagcgttttatggagcgctacgcccccaccatcaaagacctc
gcacctcgcgacatcgttgctcgctgcatggtgcaggaggttcttgacggccgtggtgcc
ggccccaataaagactacgtctacctggactgcacacacctcggtgccgaggttcttgag
acaaaactccccgacatcaccgagtttgcccgcacctacctgggagtggacccggttgtt
gagcccgtgccggtattccccaccgcccactacgccatggggggcatccccaccaatatc
cacgccgaggtactgcgcgacaacaccacggttgtccccggcctctacgcggccggggag
tgcgcgtgcgtctccgttcacggctccaaccgattgggaaccaactcgctcctcgacatt
aacgtgtttggaaagcgcgccggaaacgcggccgctgactatgcaaacggcgctgaattt
gtgccgcttcccgaagatcccgcccgcgaggtccgtgagttggtcgaaagcctgcgcagc
agtaccggaaccgagcgtctggcagacattcgtcgcgaactccaagagtctatggaccgt
ggagcccaggttttccgcaccgacgagtcgctgggcgaggtgctcggcgtgatccacgac
cttcgtcagcgctacaaaaacatttcggttcaggacaagggccagcgctacaacaccgat
ctgttggaggccatcgaactgggcttcctgctcgatctggccgaagtactcgtttttgcc
gcccgcaaccgtaaagaaagccgcggcggacacatgcgtgacgactatcctgaacgtgac
gataaaaactacatgaaacacaccatggcctatctcacgggggatccacactcacccaac
ccggaggatcacatccgcctggactggaaacccgtggttcagacccgctacgagccgatg
gaaagaaagtactaa
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