Martelella sp. AD-3: AZF01_13570
Help
Entry
AZF01_13570 CDS
T04332
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
maad
Martelella sp. AD-3
Pathway
maad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
maad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AZF01_13570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maad03021
]
AZF01_13570
03400 DNA repair and recombination proteins [BR:
maad03400
]
AZF01_13570
Enzymes [BR:
maad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AZF01_13570
Transcription machinery [BR:
maad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AZF01_13570
DNA repair and recombination proteins [BR:
maad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AZF01_13570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AMM85261
LinkDB
All DBs
Position
complement(2909135..2913277)
Genome browser
AA seq
1380 aa
AA seq
DB search
MAQTLSFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVDEPKGGRPDEGLQAVFK
SVFPMTDFSGASMLEFVSYEFEQPKFDVEECRQRDLTYAAPLKVKLRLIVFDIDEDTGAK
SIKDIKEQSVYMGDMPLMTNNATFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARVIPYRGSWLDIEFDAKDIVHARIDRRRKIPVTSLLMALGMDTEEILETFYEKAVYER
EGDGWKVPFSPERLRGQKAVTDLIDADSGEVVIEAGKKLTPRMLKKLAEGGLKALKVTDD
ELYGTFLAEDIVNMETGEIYLEAGEELDEKNLAGVIEQGIDELSILNIDHVNVGAYIRNT
LVADKNENRQDALFDIYRVMRPGEPPTMESAEAMFNSLFFDAERYDLSAVGRVKMNMRLD
LDAPDTMRVLRKEDILAVVKTLVDLRDGKGEIDDIDNLGNRRVRSVGELMENQYRLGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQINPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRKISEDGKLTDEVIYLSAMEEAKYYIAQANSVMNEDGTFVEEFVVCRHAGEVMLAPREN
INLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEAPFVGTGMEPIVA
RDSGAAIGAKRGGVVDQVDATRIVIRATEDLDASKSGVDIYRLMKFQRSNQNTCVNQRPL
VRVGDVVNRGDIIADGPSTDLGDLALGRNALVAFMPWNGYNYEDSILLSERIVSDDVFTS
IHLEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVHPGDILVGKITPK
GESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMAIER
EEIERLAKDRDDEQAILDRNVYARLADMLRGHTSIAGPKGFKKGVQLSDEVIGAYPRSQW
WMFAVEDEEAQGELEALRGQYDESKARLEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVK
RKIQPGDKMAGRHGNKGVVSRILPAEDMPFLEDGTHVDVVLNPLGVPSRMNVGQILETHL
AWGCAGMGKRIGQMLEEYQETNDIRPLKETLTKVYASEAKDEVSQFDDESLVRLADEAKR
GVSIATPVFDGAHEGDVSEMLSWAGYDPSGQSVLYDGRTGEPFDRKVTVGYMYMIKLNHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLSVELENRADEAGAEADELPDAAE
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccctttcctttaatggtcgcaggcgcgtacgcaagtttttcggaaaaatt
ccggaagtggcggagatgccgaacctcatcgaggttcagaaggcgtcctacgaccagttc
ctcatggttgacgagcccaagggcggacgtcccgacgaggggctgcaggcggtcttcaag
tccgtcttccccatgaccgatttctcgggcgcttccatgctcgaattcgtttcctacgaa
ttcgaacagccgaagttcgacgtcgaggaatgccggcagcgcgacctgacctatgccgcg
ccgctgaaggtcaagctgcgcctgatcgtgttcgacatcgacgaggacaccggcgcgaag
tcgatcaaggacatcaaggagcagtcggtctatatgggcgacatgccgctgatgaccaac
aatgcgaccttcatcgtcaacggcaccgagcgcgttatcgtctcgcagatgcaccgttcg
ccgggcgtgttcttcgaccacgacaagggcaagagccactcctccggcaagctgctgttt
gcagcccgcgtgatcccctatcgcggttcctggctcgacatcgaattcgacgccaaggac
atcgtccatgcccgtatcgaccgccgccgcaagatcccggtgacctcgcttctgatggcg
ctcggcatggacaccgaggaaattctcgagaccttctacgagaaggcggtctacgagcgt
gagggcgacggctggaaagtgccgttctcgccggaacgtctgcgcggccagaaggccgtg
accgatctgatcgacgccgacagcggcgaggtcgtgatcgaggccggcaagaagctgacc
ccgcgcatgctcaagaagctcgccgaaggcggcctgaaggcgctcaaggttaccgatgac
gaactttacggcacgttcctggccgaggacatcgtcaacatggaaaccggcgagatctat
ctcgaggccggcgaagaactggacgagaagaacctggcgggcgtgatcgagcagggcatc
gacgaactgtcgatcctcaacatcgaccacgtcaatgtcggcgcctatatccgcaacacg
ctggtcgccgacaagaacgagaaccgtcaggacgcgctcttcgacatctatcgcgtgatg
cgtccgggcgagccgccgaccatggaatcggcagaagcgatgttcaattcgctgttcttc
gatgccgagcgctacgacctctcggccgtcggccgcgtcaagatgaacatgcgtctcgac
ctcgatgcgccggacacgatgcgcgttctgcgcaaggaggacatcctcgccgtcgtcaag
acgctggtggatctccgcgacggcaagggcgagatcgacgacatcgacaatctcggcaac
cgccgcgtccgttcggtcggcgaactgatggagaaccagtaccgtctgggcctcctgcgc
atggagcgcgcgatcaaggaacgcatgtcctcgatcgagatcgacaccgtgatgccgcag
gacctgatcaacgccaagccggcggctgccgccgtgcgcgagttcttcggttcctcgcag
ctgtcgcagttcatggaccagatcaacccgctgtcggagatcacccacaagcgtcgtctg
tcggcacttggcccgggcggtctgacgcgcgaacgcgccggcttcgaagtccgcgacgtg
catccgacccattacggccgcatctgcccgatcgagacgccggaaggcccgaacatcggt
ctgatcaactcgctcgcgaccttcgcccgcgtcaacaagtacggctttatcgaaagcccg
taccgcaagatctccgaggacggcaagctcaccgatgaggtgatctatctttcggccatg
gaagaggcgaaatattacatcgcccaggccaattcggtgatgaatgaagacggcaccttc
gttgaagagttcgtcgtctgccgtcatgccggcgaagtgatgctggccccgcgcgagaac
atcaacctgatggacgtttcgccgaagcagctggtttcggtggcggccgctctcattccg
ttcctggaaaacgacgacgccaaccgcgccctgatgggctcgaacatgcagcgtcaggcc
gtgccgctgctgcgcgccgaagccccgttcgtcggaaccggcatggagccgatcgttgcc
cgtgacagtggcgccgccatcggtgccaagcgcggcggcgtggtcgaccaggtcgacgcg
acgcgtatcgttattcgcgcgacggaagacctcgatgcctccaagtcgggcgttgacatc
taccggctgatgaagttccagcgctccaaccagaacacctgcgtcaaccagcgtccgctg
gtgcgcgtcggcgacgtggtcaatcgcggcgacatcattgccgatggcccgtcgacggac
ctcggcgatctggcgctcggccgcaacgcgctggtcgcgttcatgccgtggaatggctac
aactacgaggactcgatcctgctgtccgagcggatcgtctcggatgacgtcttcacctcg
atccatctggaagaattcgaggtcatggcccgcgacaccaagctcggtccggaagaaatc
acccgcgacattccgaacgtttcggaagaagcgctgaagaacctcgacgaagccggcatc
gtctatatcggcgccgaagtgcatccgggcgatattctcgtcggcaagatcacgccgaag
ggcgaaagcccgatgacgccggaggaaaaactcctgcgcgccatcttcggcgagaaggcc
tcggacgttcgcgacacctcgatgcgcatgccgcccggcaccttcggtacggtcgtggaa
gtccgcgtgttcaaccgccacggcgtcgagaaggacgagcgcgccatggcgatcgagcgc
gaggaaatcgagcggctcgccaaggaccgtgacgacgaacaggccattctggaccgcaac
gtctatgcgcgtcttgccgacatgctgcgcggccacacgtcgattgcgggtcccaagggc
ttcaagaagggcgttcagctttccgatgaagtcatcggcgcctatccgcgttcgcagtgg
tggatgttcgccgtcgaggacgaggaagcgcagggcgaactcgaagcccttcgcggccag
tacgacgaatccaaggcccgcctcgagcagcggttcatggacaaggtcgaaaaggtccag
cgcggcgatgaaatgcctccgggcgtgatgaagatggtcaaggtctttgttgccgtgaag
cgcaagatccagcccggcgacaagatggccggccgccacggcaacaagggcgtggtctct
cgcatcctgcccgccgaagacatgccgttcctggaagacggaacccatgtcgatgtcgtg
ctgaacccgcttggcgtgccgagccgcatgaatgtcggccagatcctcgagacgcatctt
gcgtggggttgtgccggcatgggcaagcgcattggccagatgctcgaggagtatcaggaa
accaatgacatcaggccgctgaaggagacactgaccaaggtctatgcgtcggaagccaag
gacgaagtctcgcagttcgacgacgaaagcctggttcgcctggccgacgaggccaagcgc
ggcgtttccatcgccacgccggtctttgacggcgcgcatgagggcgacgtctccgagatg
ctgtcctgggcgggctatgatccgtcgggccagtcggtgctgtacgacggacgtacgggt
gagcccttcgaccgcaaggtcaccgtgggctacatgtacatgatcaagctcaaccatctg
gttgacgacaagatccacgcccgttcgatcggcccgtactcgctggtcacccagcagccg
ctgggcggcaaggcccagttcggcggacagcgtttcggcgaaatggaggtctgggcactt
gaggcctatggcgccgcctacacgctgcaggaaatgctgaccgtgaaatcggacgacgtt
gccggtcggaccaaggtctatgaagccattgtccgcggcgatgatacgttcgaggccggt
attccggaaagcttcaacgttctcgtcaaggaaatgcgttcgctgggcctttccgtcgag
cttgagaaccgtgccgacgaggccggtgcggaagccgacgaactgccggacgccgcggaa
tag
DBGET
integrated database retrieval system
