KEGG   Mya arenaria (softshell): 128203060
Entry
128203060         CDS       T09995                                 
Name
(RefSeq) cleavage stimulation factor subunit 1-like
  KO
K14406  cleavage stimulation factor subunit 1
Organism
maea  Mya arenaria (softshell)
Pathway
maea03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    128203060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:maea03019]
    128203060
Messenger RNA biogenesis [BR:maea03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     128203060
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st CSTF1_dimer WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_HPS5 Beta-prop_DCAF4 eIF2A Beta-prop_SPT8 Beta-prop_IFT140_2nd WDR54 Beta-prop_NWD2_C TEX15
Other DBs
NCBI-GeneID: 128203060
NCBI-ProteinID: XP_052760275
LinkDB
Position
9:56523095..56540646
AA seq 426 aa
MEVKQRELLYRLVISQLFYDGHQQLAVSLANLVKAHPACPPSDRLLKVIKLGLKVEEEET
GEKAFKTDFVTPGSGIDLEFETDVQTISAEAALYETCYVTSHKSACRVATFHPTGQLIAT
GSEDTSIKILDVERMLAKSATPPEVIAQETPQQAMENHPVIRTLYDHAGEISTLDFHPHH
QILVSGSKDHSVRFFEYSKPSVKKAYKSIQEAAEVRTVAFHPSGNFLLVGTSQPTLRMYD
VKTFSCYVGRNPNDQHTAAVTCAKYSPNANLYTSCSKDGNIKVWDSVSGLCINTFKNAHD
GEEVCSVQFTRNSKYILSSGKDSMVKLWELSTNRCLIIYTGAGTMGKQEHRTKCCFNHTE
DYVLFPDEKTTSLCCWDSRNAERQRLLSLGHNGIVRCINHSPTGPAFVTTSDDNRARFWY
RKADSD
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggaggtgaagcagcgagaattgttataccgacttgtaataagtcagctgttctatgat
ggtcaccaacaattagctgtgagtctagcaaacctcgtaaaggctcacccagcctgccca
ccatctgacagactgctgaaggtgatcaaactgggacttaaagttgaagaagaggagact
ggtgagaaggcattcaagacagattttgtcacccctgggtccggaattgatctggagttt
gaaactgatgttcagacaatatcagcagaggcagcgctgtatgaaacatgctatgtcaca
tcacacaaaagtgcctgcagagtggcgactttccacccgactgggcagctgattgcaaca
ggatcggaggatacttcaatcaagattctggatgtagagcgtatgttggccaagagtgcc
acacccccagaggtgattgctcaggagacaccccaacaggccatggaaaaccacccagtt
atacgtacattatatgaccatgctggggagatctcaacacttgacttccacccccatcac
cagattcttgtctccggcagtaaggaccacagtgttcgcttctttgagtactctaaaccc
tccgtgaagaaggcatacaagagcatacaggaggctgcagaagttaggactgtggcattc
cacccaagcggaaacttcttattggtcggaacaagtcagccaacattgcggatgtatgat
gtgaagacattttcctgctatgttggaaggaatccaaatgatcaacacacagcggcagtc
acttgtgccaagtacagtcccaatgccaacctatacacatcatgttccaaggacggcaat
atcaaagtatgggactctgtatcggggttgtgtatcaacacctttaaaaacgcccatgat
ggagaggaagtctgctctgtacagtttacaaggaactccaagtacattttgtcaagtggg
aaagatagcatggtgaaactgtgggagctctcaactaatcgctgcctcatcatctacaca
ggagctggaaccatggggaaacaggagcacaggactaagtgctgctttaaccacacagaa
gactatgtgttgtttccggatgaaaaaacaacaagcctgtgttgctgggattccagaaat
gcagagagacagcgcctcctttcacttggtcacaatggtattgtccgttgcatcaaccac
tccccgacaggtcctgcctttgtgaccaccagtgatgacaacagggctagattctggtac
aggaaagcagactccgattaa

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