Mya arenaria (softshell): 128208024
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Entry
128208024 CDS
T09995
Name
(RefSeq) uncharacterized protein LOC128208024
KO
K26457
neuronal PAS domain-containing protein 4
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128208024
Transcription factors [BR:
maea03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128208024
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_11
PAS_3
PAS
HLH
Motif
Other DBs
NCBI-GeneID:
128208024
NCBI-ProteinID:
XP_052767265
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Position
11:5145948..5162426
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AA seq
863 aa
AA seq
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MAPGPVEELALLELERSNKGASKQRRDQINGEIGTMRDLLPLPESARQRLSQLQIMSLSC
VYIRKCNILQKMLPSNRCSIEVPCDFSSALTGFILVTTRDGKLVYISENVTEYLGHSMVD
MKTQGDSLFDIVDKRDHGTVQAQLLHGSTSAEGSQDRQISFFCRMNMSRTLKRQGGFGDV
KVMHVRGHLVPVGGKETSPEQHMFMALCTPLITPDVKESLIQNNTTVFKSVHKLDMSFIE
ITETGEFHLGLGTTEVEGRSWYSMLHPEDLAEARAKHMQLIKSRHEMGCMMTVRMLTETH
ETVWVNIVMHVRQALVTNSDDPVIVCINQVVSENEAAQFKSQGQLFALFAARTPDMFFGG
HHFNQLQQEMLTRQHAQAYMQQQPAQPQGPPGFFAEQQRYQYTAPSQTQTSFPQQQSQYM
GGIDSICQQQRTQGHTSTIRALKRKLQENFISSCKPSKMSRVGSFDSEDGGFADFISGGE
TQYVMNVNVFRSAGSASQAVDNGGIAAFTGETMPLVYQHNSLDPMHALRLKKSMRLPVSM
NPVAFGAAPIVQKLPPTCTLEQVVPEVVIPDCYLTPDPSPASSPKPLISRTGIKQETQEI
KQLTSYVMGRLDELKQNQTISEPSVKLDGKKRKNLPIIDATFVDTFFDEIEPMLVRPGSV
EIKTEPMSPPVPMVRESHLSPPVTQTSHTPSPPPTVLPMPPTCELKEELTLEDCTYLEEF
LGLVGSAGPEIQAAFSPVSVADSMSPVASPTSVGTGCMPESLSPRAPTYGSNHCIKQQSS
MDQTYPELSPCSTSPGYEGRDDLMDPDNWLLEPISLPLEMTLDGLDTLPEMRQDVRQDEL
CRLKQILQQTWGPCGSFSHKTTL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgggccctgtagaagagctggctcttttagaattagagaggtcgaacaagggg
gcctcaaagcagcggcgagatcagataaatggcgagattggcacgatgcgcgacctactt
ccgctcccggagtccgctcgacagagactatcccagcttcaaataatgtcgcttagctgc
gtgtatatcaggaaatgtaacatattacagaaaatgctgccaagcaatcgttgctcaatc
gaagtgccttgcgatttctcatcggcactgactgggttcatacttgtgacgacccgggac
ggcaagctggtctatatctcggagaatgtaaccgagtacctcggacactcaatggtggat
atgaaaacccagggcgacagtttgttcgacattgtggacaagcgggaccatggaactgtg
caggcgcagttactccatggctccacttccgccgagggatcccaggaccgtcagatctct
tttttctgtcgcatgaacatgtcacggacgctcaaacgccaaggcggcttcggtgatgtc
aaggtgatgcacgtgcgcggtcacttggtaccagttggcgggaaagagacgagccccgag
cagcacatgttcatggcgctgtgcacgcccctcatcacccctgacgtaaaagaaagcctt
atacagaacaacacaactgtgttcaagagcgttcacaagctcgacatgtccttcatcgaa
atcaccgagacaggagagtttcatctggggcttgggacaacggaagtggagggccgctcc
tggtactccatgcttcatccggaggacctcgccgaggcccgcgctaaacacatgcagttg
attaaatcccgacacgagatgggatgcatgatgacagtgcgcatgctcacggagacgcac
gagaccgtgtgggtgaatatagtgatgcacgtgcgacaggcgctcgttaccaatagtgac
gacccggttatcgtctgcattaatcaagttgtcagcgagaacgaggctgctcaattcaaa
agtcaagggcaactgtttgccctgtttgctgcaaggacaccggacatgttcttcggcggc
caccacttcaaccaactacagcaggagatgctcacacgacaacacgctcaggcgtacatg
cagcagcaaccggcccagccccagggacccccgggcttctttgccgagcaacagcgatac
cagtacaccgccccttctcagacacagactagctttccgcaacagcagtctcagtatatg
ggcggaatcgactcaatctgccaacagcagaggactcagggacacacgagcaccatcagg
gctctcaagcggaaactacaggaaaacttcatatcatcatgcaaacctagcaagatgtcc
agggtgggttcatttgacagcgaggatggtggttttgcggacttcatctcgggaggtgag
acacagtatgtcatgaatgtcaacgtatttaggtctgccggctccgcttcacaagctgtg
gacaatggaggtatcgctgctttcactggcgaaaccatgccattggtctaccagcataat
agcctggaccccatgcacgccctacgactgaagaagtccatgcgtctgccagtatctatg
aatcctgttgctttcggtgcggcacccattgtccagaaactgccaccaacttgcacctta
gagcaggttgttccggaagtagtcattcctgattgttacctgacccctgacccatccccg
gcttcctcgcccaaacctctgatctccaggacaggtatcaaacaggaaacacaggaaatc
aaacagctgacgtcatacgtaatgggtagacttgacgaattaaaacagaaccagacaatc
tcagaaccatcggtaaaattagatggaaagaaacggaaaaatctgccaatcattgatgcc
acattcgttgatacattcttcgatgagatagagcctatgctcgtcagaccaggcagtgtc
gagatcaagaccgagcctatgtctcctccggtgcctatggttcgggagagccacctgtct
cccccagtcacccagacatcgcacacgccttctccgccgcccactgtcttgccaatgccg
ccgacgtgcgaactgaaggaagagctcacactggaagactgcacatacctggaggagttc
cttggcctggtaggttcggctggtcctgaaatccaagccgcgttttctccggtgtccgtc
gccgacagcatgtctccagtcgcctctccgacgtccgttggcaccggctgtatgccggag
tccctgtcacctagggcaccaacatatggctccaaccattgcatcaagcagcagagctct
atggatcagacatacccagagctcagcccctgctccacttcccccggatatgagggtcgg
gacgatctcatggacccagacaattggctgctggagccaatcagtctgcccctggaaatg
acattagacggcctcgacaccctgccggaaatgaggcaggatgtgcgacaggacgagcta
tgccgcctgaagcagattcttcagcagacctggggaccatgtggttccttctcgcataaa
accaccctgtag
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